RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 SAMD14Q8IZD0 417 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF514Q96K75 400 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MMADHCQ9H3L0 296 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TASP1Q9H6P5 420 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 POPDC2Q9HBU9 364 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CNGB3Q9NQW8 809 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 IMPAD1Q9NX62 359 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TNFSF13BQ9Y275 285 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TAF4O00268 1085 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ZSCAN9O15535 394 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 AVILO75366 819 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PCDH8O95206 1070 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SLC9A1P19634 815 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ATP6V1C1P21283 382 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 GPC1P35052 558 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CCNG1P51959 295 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CNGA3Q16281 694 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PLEKHM3Q6ZWE6 761 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 TRABDQ9H4I3 376 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PRDM8Q9NQV8 689 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SNX12Q9UMY4 172 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SORCS3Q9UPU3 1222 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 C2CD2LO14523 706 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SYN3O14994 580 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SEPT4O43236 478 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ATP9BO43861 1147 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CATP04040 527 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CNPP09543 421 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 TBX4P57082 545 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RPP38P78345 283 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 FLOT2Q14254 428 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 C6orf10Q5SRN2 563 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SCARA3Q6AZY7 606 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 FAM92BQ6ZTR7 304 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NUP93Q8N1F7 819 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CYP4Z2PQ8N1L4 340 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SLC35G2Q8TBE7 412 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SYTL5Q8TDW5 730 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ANKRD27Q96NW4 1050 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PDCD2LQ9BRP1 358 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CDH19Q9H159 772 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ARL15Q9NXU5 204 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PCDH10Q9P2E7 1040 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 FBXL5Q9UKA1 691 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 Q9Y3F1 56 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PCDHB11Q9Y5F2 797 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 LTBP3Q9NS15 1303 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CD3EAPO15446 510 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RASSF9O75901 435 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ALBP02768 609 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 COL6A1P12109 1028 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 INSRRP14616 1297 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ATP4AP20648 1035 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CDC25AP30304 524 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CARSP49589 748 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 VSNL1P62760 191 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SUZ12Q15022 739 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ERMARDQ5T6L9 678 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 C11orf63Q6NUN7 778 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 UBE2R2Q712K3 238 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CHMP1BQ7LBR1 199 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SYTL1Q8IYJ3 562 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RGL4Q8IZJ4 473 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 TEX9Q8N6V9 391 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ERP44Q9BS26 406 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 C11orf84Q9BUA3 381 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RTFDC1Q9BY42 306 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CCDC134Q9H6E4 229 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 POLMQ9NP87 494 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 AVENQ9NQS1 362 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ADA2Q9NZK5 511 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PPARGC1AQ9UBK2 798 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RPS6KL1Q9Y6S9 549 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CABIN1Q9Y6J0 2220 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NEMP2A6NFY4 417 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 EIF4E1BA6NMX2 242 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 DDNO94850 711 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ANXA6P08133 673 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PIM1P11309 404 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 APLP1P51693 650 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 DEFA1P59665 94 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 DEFA3P59666 94 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 EPS8Q12929 822 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ADRM1Q16186 407 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 GOLGA7BQ2TAP0 167 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 TRIM60Q495X7 471 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 DACT2Q5SW24 774 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RFX8Q6ZV50 586 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 MTSS1LQ765P7 747 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 COLGALT2Q8IYK4 626 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ZKSCAN4Q969J2 545 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 REXO5Q96IC2 774 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PORCNQ9H237 461 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 EFCAB1Q9HAE3 211 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 DDX43Q9NXZ2 648 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RPS6KB2Q9UBS0 482 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PTCH2Q9Y6C5 1203 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SQORQ9Y6N5 450 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms