RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 NFKB1P19838 968 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 CCR1P32246 355 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 COILP38432 576 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 VSNL1P62760 191 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 AMPD2Q01433 879 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 NAB2Q15742 525 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ZC3H12AQ5D1E8 599 aaKnown RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 JAMLQ86YT9 394 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 OR9Q1Q8NGQ5 310 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ELMO1Q92556 727 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 PMEPA1Q969W9 287 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ZDHHC9Q9Y397 364 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 H0Y858 1186 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 GRK4P32298 578 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 APOBEC3HQ6NTF7 200 aaKnown RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 MARK4Q96L34 752 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ACAT2Q9BWD1 397 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 EIF3DO15371 548 aaKnown RBP eCLIP8.01□□□□□ -1.136e-6■■■■□ 21
SCN9A-201ENST00000303354 DNAJC8O75937 253 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 NUDT2P50583 147 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 DENND1BQ6P3S1 775 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 SCIMPQ6UWF3 145 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 CENPLQ8N0S6 344 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 SLC4A5Q9BY07 1137 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 SIRPGQ9P1W8 387 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 TRAV19A0A0A6YYK7 116 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 EVPLLA8MZ36 301 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 GPR1P46091 355 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 BST2Q10589 180 aaKnown RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ZBTB17Q13105 803 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 KCNA10Q16322 511 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 EFL1Q7Z2Z2 1120 aaKnown RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 CCDC60Q8IWA6 550 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 CATSPER2Q96P56 530 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 EIF3LQ9Y262 564 aaKnown RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 PPP1R3GB7ZBB8 358 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ZNF500O60304 480 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ETS1P14921 441 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ITGALP20701 1170 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 OCA2Q04671 838 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 NOMO2Q5JPE7 1267 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 LRRC73Q5JTD7 316 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 MARC1Q5VT66 337 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 DNAJC14Q6Y2X3 702 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 MILR1Q7Z6M3 343 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 BRSK2Q8IWQ3 736 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 C12orf29Q8N999 325 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ATP8B4Q8TF62 1192 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ADGRE3Q9BY15 652 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 COL5A2P05997 1499 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 SHROOM2Q13796 1616 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 CYP11B1P15538 503 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 GPR158Q5T848 1215 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 PPP2R2DQ66LE6 453 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 UNC45BQ8IWX7 931 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 EPS8L3Q8TE67 593 aaKnown RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 USP7Q93009 1102 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 AKAP7Q9P0M2 348 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ISM1B1AKI9 464 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 BTBD19C9JJ37 291 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 KDM1AO60341 852 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 MTA2O94776 668 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 FLT3P36888 993 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 CCNG1P51959 295 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 GABPB1Q06547 395 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-201ENST00000303354 DUSP4Q13115 394 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 DNAJC3Q13217 504 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 UAP1L1Q3KQV9 507 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 MRNIPQ6NTE8 343 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 CATSPERGQ6ZRH7 1159 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 FGD2Q7Z6J4 655 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 ASAH2Q9NR71 780 aa8.01□□□□□ -1.13
SCN9A-201ENST00000303354 A0A1W2PQ67 120 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 ERMARDQ5T6L9 678 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 B3GALT6Q96L58 329 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 INVSQ9Y283 1065 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 E9PBE3 544 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 RBAK-RBAKDNI3L0D1 243 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 CXCL11O14625 94 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 SLITRK3O94933 977 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 RARGP13631 454 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 RPL17P18621 184 aaKnown RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 TYMPP19971 482 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 CELF3Q5SZQ8 465 aaKnown RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 TIGD7Q6NT04 549 aaPredicted RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 PRSS58Q8IYP2 241 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 ST13P4Q8IZP2 240 aaPredicted RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 KRT84Q9NSB2 600 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 MEGF6O75095 1541 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 PTPRUQ92729 1446 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 WBP4O75554 376 aaKnown RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 PTPN11Q06124 597 aaPredicted RBP8□□□□□ -1.13
SCN9A-201ENST00000303354 MAP2K5Q13163 448 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 CNSTQ6PJW8 725 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 STX19Q8N4C7 294 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 ROGDIQ9GZN7 287 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 SLC24A3Q9HC58 644 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 CD163L1Q9NR16 1453 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 LRRC7Q96NW7 1537 aa8□□□□□ -1.13
SCN9A-201ENST00000303354 SREBF1P36956 1147 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms