RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ZC3H12AQ5D1E8 599 aaKnown RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 FAM78AQ5JUQ0 283 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 CES5AQ6NT32 575 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 C11orf63Q6NUN7 778 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 CC2D1AQ6P1N0 951 aaPredicted RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 GET4Q7L5D6 327 aaPredicted RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 FAM131BQ86XD5 332 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 MIB1Q86YT6 1006 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 ARID3BQ8IVW6 561 aaPredicted RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 CCDC185Q8N715 623 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 ST13P5Q8NFI4 369 aaPredicted RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 MAFAQ8NHW3 353 aaPredicted RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 RNF139Q8WU17 664 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 MYEOVQ96EZ4 313 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 RIPOR3Q96MK2 946 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 TRIM62Q9BVG3 475 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 TRPV4Q9HBA0 871 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 TRPC7Q9HCX4 862 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 DDIT4Q9NX09 232 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 ARHGEF38Q9NXL2 777 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 CDH7Q9ULB5 785 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 ARHGAP26Q9UNA1 814 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 TLR6Q9Y2C9 796 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 CPQQ9Y646 472 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 TRAV19A0A0A6YYK7 116 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 SLC12A8A0AV02 714 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 LAMP2P13473 410 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 TCF3P15923 654 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 RDXP35241 583 aaKnown RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 ADRA1BP35368 520 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 PCK1P35558 622 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 VIPR2P41587 438 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 MARCKSL1P49006 195 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 PEX5P50542 639 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 ARSEP51690 589 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 DEUP1Q05D60 604 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 RING1Q06587 406 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 NME3Q13232 169 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 SMAD2Q15796 467 aaKnown RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 ZNF77Q15935 545 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 CA9Q16790 459 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 NADSYN1Q6IA69 706 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 Q6ZNB5 142 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 NYAP1Q6ZVC0 841 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 RSRC2Q7L4I2 434 aaKnown RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 ANKS1BQ7Z6G8 1248 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 ZNF683Q8IZ20 524 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 ZSCAN18Q8TBC5 510 aaPredicted RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 KRT35Q92764 455 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 GOLGA1Q92805 767 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 CDK5RAP1Q96SZ6 601 aaKnown RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 RPP25Q9BUL9 199 aaKnown RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 PLA2G2FQ9BZM2 168 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 TDP1Q9NUW8 608 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 SMPD4Q9NXE4 827 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.87□□□□□ -0.83
RFX3-201ENST00000302303 GDE1Q9NZC3 331 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 RASAL2Q9UJF2 1139 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 STAP1Q9ULZ2 295 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 HBS1LQ9Y450 684 aaKnown RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 SYNJ2BP-COX16A0A087WUM0 186 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 C3orf70A6NLC5 250 aaPredicted RBP9.86□□□□□ -0.83
RFX3-201ENST00000302303 TMEM110-MUSTN1A8MSY1 372 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 FAM72CH0Y354 149 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 LEFTY2O00292 366 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 DDX3YO15523 660 aaKnown RBP9.86□□□□□ -0.83
RFX3-201ENST00000302303 FTCDO95954 541 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 F9P00740 461 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 HMBSP08397 361 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 RARAP10276 462 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 MBL2P11226 248 aaPredicted RBP9.86□□□□□ -0.83
RFX3-201ENST00000302303 IL4RP24394 825 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 TBX4P57082 545 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 COG7P83436 770 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 USP4Q13107 963 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 SEMA3BQ13214 749 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 PPP2R5DQ14738 602 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 SKIV2LQ15477 1246 aaKnown RBP9.86□□□□□ -0.83
RFX3-201ENST00000302303 ARHGAP29Q52LW3 1261 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 MEI1Q5TIA1 1274 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 FAM72AQ5TYM5 149 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 TANGO2Q6ICL3 276 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 FAM72DQ6L9T8 149 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 HTR3DQ70Z44 454 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 DAAM2Q86T65 1068 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 FAM72BQ86X60 149 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 PYROXD2Q8N2H3 581 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 FAM71BQ8TC56 605 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 SH3RF2Q8TEC5 729 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 ALG3Q92685 438 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 FGF14Q92915 247 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 NTAN1Q96AB6 310 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 TRIM44Q96DX7 344 aaPredicted RBP9.86□□□□□ -0.83
RFX3-201ENST00000302303 HES6Q96HZ4 224 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 CALR3Q96L12 384 aaKnown RBP9.86□□□□□ -0.83
RFX3-201ENST00000302303 NECTIN4Q96NY8 510 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 SERPINB11Q96P15 392 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 GCNAQ96QF7 691 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 WDR24Q96S15 920 aa9.86□□□□□ -0.83
RFX3-201ENST00000302303 PRMT1Q99873 361 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms