RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 TMEM215Q68D42 235 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 ZNF605Q86T29 641 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 TMPRSS6Q8IU80 811 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 CBWD2Q8IUF1 395 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 OXR1Q8N573 874 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 UCMAQ8WVF2 138 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 GOLGA1Q92805 767 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 SIPA1Q96FS4 1042 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 TMEM176AQ96HP8 235 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 HNRNPABQ99729 332 aaKnown RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 LHX5Q9H2C1 402 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 CLDN5O00501 218 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 TGFB1I1O43294 461 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 KRT18P05783 430 aaKnown RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 KRT19P08727 400 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 ITPKBP27987 946 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 CHKAP35790 457 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 VASPP50552 380 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 RPS14P62263 151 aaKnown RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 KCNT1Q5JUK3 1230 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 KIAA1324Q6UXG2 1013 aaKnown RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 EIF2B4Q9UI10 523 aaKnown RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 DNMT3LQ9UJW3 386 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 H0Y8X5 98 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 RRP8O43159 456 aaKnown RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 GCNT3O95395 438 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 KLKB1P03952 638 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 ACTN2P35609 894 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 CDH8P55286 799 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 TNNC1P63316 161 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 SNRNP35Q16560 246 aaKnown RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 PROX2Q3B8N5 592 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 RAB41Q5JT25 222 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 KIAA0895LQ68EN5 471 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 XKR5Q6UX68 686 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 LRRC69Q6ZNQ3 347 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 SV2BQ7L1I2 683 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 SCML4Q8N228 414 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 PIP4K2CQ8TBX8 421 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 ZNF578Q96N58 590 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 SDCBP2Q9H190 292 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 RSPH9Q9H1X1 276 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 C6orf106Q9H6K1 298 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-201ENST00000302278 ELOVL2Q9NXB9 296 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 FZD4Q9ULV1 537 aa6.81□□□□□ -1.32
ITGB1-201ENST00000302278 BSNQ9UPA5 3926 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 SCN8AQ9UQD0 1980 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 PLK4O00444 970 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 BEST1O76090 585 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 WASP42768 502 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 SF3A1Q15459 793 aaKnown RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 TRIP4Q15650 581 aaPredicted RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 MPP7Q5T2T1 576 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 STXBP4Q6ZWJ1 553 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 SCD5Q86SK9 330 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 IQCHQ86VS3 1027 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 FGF11Q92914 225 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 PLD4Q96BZ4 506 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 BIRC7Q96CA5 298 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 TNMDQ9H2S6 317 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 IGSF5Q9NSI5 407 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 CCDC39Q9UFE4 941 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 CIZ1Q9ULV3 898 aaPredicted RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 UBR5O95071 2799 aaPredicted RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 A0A1W2PPC4 97 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 A8MXQ7 604 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 WASH3PC4AMC7 463 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 C4BPAP04003 597 aaKnown RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 EPHA8P29322 1005 aaPredicted RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 NUDT1P36639 197 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 SRSF1Q07955 248 aaKnown RBP eCLIP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 LARP1BQ659C4 914 aaKnown RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 CLEC20AQ6ZU45 233 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 SLC9A9Q8IVB4 645 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 OR6B3Q8NGW1 331 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 FAM84AQ96KN4 292 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 ELF4Q99607 663 aaPredicted RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 BACH2Q9BYV9 841 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 DPH1Q9BZG8 443 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 CUEDC2Q9H467 287 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 NMUR1Q9HB89 426 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 AGPAT3Q9NRZ7 376 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 KRT82Q9NSB4 513 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 KBTBD4Q9NVX7 518 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 GOLGA8IPA6NC78 632 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 GOLGA8JA6NMD2 632 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 PRPF6O94906 941 aaKnown RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 SEMA4FO95754 770 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 CSNK1EP49674 416 aaKnown RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 BCAT1P54687 386 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 ERVPABLB-1P60509 514 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 E2F4Q16254 413 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 HS2ST1Q7LGA3 356 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 GPRIN1Q7Z2K8 1008 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 MYO19Q96H55 970 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 PABPC3Q9H361 631 aaKnown RBP6.8□□□□□ -1.32
ITGB1-201ENST00000302278 SMYD3Q9H7B4 428 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 PANK4Q9NVE7 773 aa6.8□□□□□ -1.32
ITGB1-201ENST00000302278 CHORDC1Q9UHD1 332 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms