RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 MTFR1Q15390 333 aa16.13■□□□□ 0.17
CHAF1A-201ENST00000301280 TAZQ16635 292 aa16.13■□□□□ 0.17
CHAF1A-201ENST00000301280 NUDCD3Q8IVD9 361 aa16.13■□□□□ 0.17
CHAF1A-201ENST00000301280 SCN4BQ8IWT1 228 aa16.13■□□□□ 0.17
CHAF1A-201ENST00000301280 TNS4Q8IZW8 715 aa16.13■□□□□ 0.17
CHAF1A-201ENST00000301280 SGF29Q96ES7 293 aa16.13■□□□□ 0.17
CHAF1A-201ENST00000301280 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHAF1A-201ENST00000301280 IGKV6-21A0A0C4DH24 114 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 SMIM28A0A1B0GU29 152 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 DNAJC6O75061 913 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 ASMTLO95671 621 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 CMC1Q7Z7K0 106 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 TLK2Q86UE8 772 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 NAT8LQ8N9F0 302 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 SRPK1Q96SB4 655 aaKnown RBP16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 SLC24A3Q9HC58 644 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 WDR35Q9P2L0 1181 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 PCDHGC3Q9UN70 934 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 NUP205Q92621 2012 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 IQANK1A0A1B0GTG1 560 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 C3orf70A6NLC5 250 aaPredicted RBP16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 GOLGA8CPA6NN73 597 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 ZMPSTE24O75844 475 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 TKTP29401 623 aaKnown RBP16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 SLC18A1P54219 525 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 PPIL2Q13356 520 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 PLEKHG4Q58EX7 1191 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 ADGRF2Q8IZF7 708 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 NKD2Q969F2 451 aaPredicted RBP16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 TRIM55Q9BYV6 548 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 DDIT4Q9NX09 232 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 C15orf41Q9Y2V0 281 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 HTTP42858 3142 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 ARHGAP42A6NI28 874 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 NCF2P19878 526 aaPredicted RBP16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 BNIP1Q12981 228 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 RIPK1Q13546 671 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 TAF1CQ15572 869 aaPredicted RBP16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 TDRPQ86YL5 185 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 RNF135Q8IUD6 432 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 CAB39LQ9H9S4 337 aa16.12■□□□□ 0.17
CHAF1A-201ENST00000301280 DFFAO00273 331 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 NEMP1O14524 444 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 MMP3P08254 477 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 CSH1P0DML2 217 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 CSH2P0DML3 217 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 PSMB4P28070 264 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 ITKQ08881 620 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 KLHL38Q2WGJ6 581 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 NOTUMQ6P988 496 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 COLGALT1Q8NBJ5 622 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 UTP4Q969X6 686 aaKnown RBP16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 CLPTM1LQ96KA5 538 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 ASB7Q9H672 318 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 NRDE2Q9H7Z3 1164 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 KRT82Q9NSB4 513 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 DRG1Q9Y295 367 aaKnown RBP16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 B3GAT3O94766 335 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 HMBSP08397 361 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 ESRRAP11474 423 aaPredicted RBP16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 PCK1P35558 622 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 TKTL1P51854 596 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 EPHB1P54762 984 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 DEUP1Q05D60 604 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 CRYMQ14894 314 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 SLC27A1Q6PCB7 646 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 PQLC3Q8N755 202 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 NUDCD1Q96RS6 583 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 AP5M1Q9H0R1 490 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 TRIP11Q15643 1979 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 F8W810 466 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 H3BRJ5 948 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 PFKMP08237 780 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 HOXA11P31270 313 aaPredicted RBP16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 PEX19P40855 299 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 CXCR3P49682 368 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 YWHAZP63104 245 aaKnown RBP16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 RAPH1Q70E73 1250 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 ASRGL1Q7L266 308 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 ARRDC4Q8NCT1 418 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 TMEM120AQ9BXJ8 343 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 MAN1C1Q9NR34 630 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 PRKAG3Q9UGI9 489 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 USH1CQ9Y6N9 552 aa16.11■□□□□ 0.17
CHAF1A-201ENST00000301280 ZNF236Q9UL36 1845 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 A0A1B0GUA9 196 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 GYG2O15488 501 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 GABBR2O75899 941 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 KRT37O76014 449 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 BZW1Q7L1Q6 419 aaKnown RBP16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 MAML3Q96JK9 1138 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 PRDM12Q9H4Q4 367 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 RRAGCQ9HB90 399 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 RXFP1Q9HBX9 757 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 MFSD11O43934 449 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 LGR5O75473 907 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 AP1G2O75843 785 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 OR4Q2P0C623 313 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 HIC1Q14526 733 aa16.1■□□□□ 0.17
CHAF1A-201ENST00000301280 DLG2Q15700 870 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms