RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GDPD5Q8WTR4 605 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 MOCOSQ96EN8 888 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 CDT1Q9H211 546 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 COPS7BQ9H9Q2 264 aaPredicted RBP13.7□□□□□ -0.22
CASC4-201ENST00000299957 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.7□□□□□ -0.228e-6■■■□□ 18.7
CASC4-201ENST00000299957 ZNF536O15090 1300 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 PAPSS1O43252 624 aaPredicted RBP13.7□□□□□ -0.22
CASC4-201ENST00000299957 HBP1O60381 514 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 GFAPP14136 432 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 FUT11Q495W5 492 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 EFHD1Q9BUP0 239 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
CASC4-201ENST00000299957 A0A096LPK6 155 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 NCF1BA6NI72 391 aaPredicted RBP13.7□□□□□ -0.22
CASC4-201ENST00000299957 NCF1CA8MVU1 366 aaPredicted RBP13.7□□□□□ -0.22
CASC4-201ENST00000299957 C19orf81C9J6K1 198 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 CLDN5O00501 218 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 SUPT7LO94864 414 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 CYP2C9P11712 490 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 NCF1P14598 390 aaPredicted RBP13.7□□□□□ -0.22
CASC4-201ENST00000299957 SERPINB9P50453 376 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 PGGT1BP53609 377 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 PHEXP78562 749 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 OLIG2Q13516 323 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 ACSBG2Q5FVE4 666 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 RALGPS1Q5JS13 557 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 WASHC2DQ5SRD0 308 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 OR6J1Q8NGC5 347 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 CCDC138Q96M89 665 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 SPATC1LQ9H0A9 340 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 EPB41L4BQ9H329 900 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 HNRNPCL1O60812 293 aaKnown RBP13.69□□□□□ -0.22
CASC4-201ENST00000299957 SPAG6O75602 509 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 CSHL1Q14406 222 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 RAB6CQ53S08 254 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 KLC3Q6P597 504 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 KCNK16Q96T55 309 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 ILKAPQ9H0C8 392 aaPredicted RBP13.69□□□□□ -0.22
CASC4-201ENST00000299957 RAB6CQ9H0N0 254 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 C2CD2LO14523 706 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 SH3BP5O60239 455 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 HNRNPCP07910 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
CASC4-201ENST00000299957 ZFXP17010 805 aaPredicted RBP13.69□□□□□ -0.22
CASC4-201ENST00000299957 PLOD1Q02809 727 aaPredicted RBP13.69□□□□□ -0.22
CASC4-201ENST00000299957 DGKDQ16760 1214 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 FAM83AQ86UY5 434 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 WDR60Q8WVS4 1066 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 CYGBQ8WWM9 190 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 HTR3CQ8WXA8 447 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 RNF157Q96PX1 679 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 PRPF18Q99633 342 aaKnown RBP13.69□□□□□ -0.22
CASC4-201ENST00000299957 ZNF518BQ9C0D4 1074 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 RNF181Q9P0P0 153 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 RABGEF1Q9UJ41 708 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 ADGRA2Q96PE1 1338 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 TRUB2O95900 331 aaKnown RBP13.69□□□□□ -0.22
CASC4-201ENST00000299957 ITGAVP06756 1048 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 SP2Q02086 613 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 PPP1R26Q5T8A7 1209 aaPredicted RBP13.69□□□□□ -0.22
CASC4-201ENST00000299957 HPS6Q86YV9 775 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 GABPB2Q8TAK5 448 aaPredicted RBP13.69□□□□□ -0.22
CASC4-201ENST00000299957 TWNKQ96RR1 684 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 AP5M1Q9H0R1 490 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 CCDC167Q9P0B6 97 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 MYH7BA7E2Y1 1941 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
CASC4-201ENST00000299957 CXorf49A8MYA2 514 aaPredicted RBP13.68□□□□□ -0.22
CASC4-201ENST00000299957 ACKR2O00590 384 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 ENDOD1O94919 500 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 VAPBO95292 243 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 TPBGLP0DKB5 382 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 R3HDM1Q15032 1099 aaKnown RBP13.68□□□□□ -0.22
CASC4-201ENST00000299957 PDK1Q15118 436 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 SPDYAQ5MJ70 313 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 C10orf107Q8IVU9 208 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 EXOC8Q8IYI6 725 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 TDRD5Q8NAT2 981 aaKnown RBP13.68□□□□□ -0.22
CASC4-201ENST00000299957 SEC14L1Q92503 715 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 ARHGEF3Q9NR81 526 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 BARX2Q9UMQ3 279 aaPredicted RBP13.68□□□□□ -0.22
CASC4-201ENST00000299957 MYO9BQ13459 2157 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 MYH3P11055 1940 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 ADM5C9JUS6 153 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 HCRTO43612 131 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 MPP3Q13368 585 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
CASC4-201ENST00000299957 ULK2Q8IYT8 1036 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 INPP5DQ92835 1189 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 TNIP3Q96KP6 325 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 CCT7Q99832 543 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 DCUN1D5Q9BTE7 237 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 LRMDAQ9H2I8 198 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 PRDM12Q9H4Q4 367 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 TCF7L2Q9NQB0 619 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 KRT82Q9NSB4 513 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 UTP6Q9NYH9 597 aaKnown RBP13.68□□□□□ -0.22
CASC4-201ENST00000299957 ARHGAP28Q9P2N2 729 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 CACNG4Q9UBN1 327 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 CNTNAP2Q9UHC6 1331 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms