RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CBWD3Q5JTY5 395 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CBWD5Q5RIA9 395 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ZNF720Q7Z2F6 126 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 KLHL25Q9H0H3 589 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ELOVL6Q9H5J4 265 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ATP12AP54707 1039 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ITGA9Q13797 1035 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 EARS2Q5JPH6 523 aaKnown RBP13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CCDC3Q9BQI4 270 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 HDHD2Q9H0R4 259 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TRPM5Q9NZQ8 1165 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NAALADL1Q9UQQ1 740 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 IQSEC2Q5JU85 1478 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PEX1O43933 1283 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FAM153BP0C7A2 387 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 BACE1P56817 501 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MAPK11Q15759 364 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FAM153CQ494X1 144 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 GATAD2AQ86YP4 633 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FAM120BQ96EK7 910 aaKnown RBP13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FUT8Q9BYC5 575 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PDGFDQ9GZP0 370 aaPredicted RBP13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ACTR8Q9H981 624 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 AP5Z1O43299 807 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SYNCRIPO60506 623 aaKnown RBP13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SREBF1P36956 1147 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 EPHB3P54753 998 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 HDDC2Q7Z4H3 204 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 WDR49Q8IV35 697 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 APBA2Q99767 749 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 STMN3Q9NZ72 180 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MPP6Q9NZW5 540 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TISP43B9A030 160 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PIK3CDO00329 1044 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MAP3K13O43283 966 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MSH3P20585 1137 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SSTR1P30872 391 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FMO4P31512 558 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ELK3P41970 407 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PTPN11Q06124 597 aaPredicted RBP13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ZFYVE1Q9HBF4 777 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 KLHL1Q9NR64 748 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 VPS9D1Q9Y2B5 631 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TECPR2O15040 1411 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TRIM43BA6NCK2 446 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FAM86B1E9PN63 330 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SMAPO00193 183 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 USP12O75317 370 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 BST2Q10589 180 aaKnown RBP13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 HERC6Q8IVU3 1022 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SPPL2AQ8TCT8 520 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PIK3R5Q8WYR1 880 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 DPF3Q92784 378 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ZBTB45Q96K62 511 aaPredicted RBP13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 RSPH9Q9H1X1 276 aaPredicted RBP13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SPACA6W5XKT8 324 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PDZK1P1A8MUH7 402 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ETS1P14921 441 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MUTP22033 750 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ATP1A4Q13733 1029 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ACOX1Q15067 660 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PGM5Q15124 567 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 DDHD1Q8NEL9 900 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 GFM2Q969S9 779 aaKnown RBP13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PROSCO94903 275 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 OR1E1P30953 314 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FNDC5Q8NAU1 212 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MID1IP1Q9NPA3 183 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CRYL1Q9Y2S2 319 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SNCAIPQ9Y6H5 919 aa13.91□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NEXMIFQ5QGS0 1516 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 KIF1CO43896 1103 aaKnown RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 RPL21P46778 160 aaKnown RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 GRIK4Q16099 956 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 Q4G0T1 1027 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NPNTQ6UXI9 565 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MTSS1LQ765P7 747 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CYP4Z1Q86W10 505 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 KIAA0895Q8NCT3 520 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 RTFDC1Q9BY42 306 aaPredicted RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 POMKQ9H5K3 350 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 POLG2Q9UHN1 485 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 UBDO15205 165 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MAPK1P28482 360 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 YWHAZP63104 245 aaKnown RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MRPS35P82673 323 aaKnown RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NEDD8Q15843 81 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 C9orf131Q5VYM1 1079 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 KCNMB4Q86W47 210 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SLC26A11Q86WA9 606 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 DCLK3Q9C098 648 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NMRK1Q9NWW6 199 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SAE1Q9UBE0 346 aaPredicted RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SLC9A8Q9Y2E8 581 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ACOT9Q9Y305 439 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 GAKO14976 1311 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 RIPK2O43353 540 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms