RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ATP2A3Q93084 1043 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 TPSD1Q9BZJ3 242 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 DUS2Q9NX74 493 aaKnown RBP22.08■■□□□ 1.13
SMCO4-201ENST00000298966 MAGED2Q9UNF1 606 aaPredicted RBP22.08■■□□□ 1.13
SMCO4-201ENST00000298966 PCDHB5Q9Y5E4 795 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 BTNL10A8MVZ5 291 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 KPNA7A9QM74 516 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 PATE3B3GLJ2 98 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 DDX3XO00571 662 aaKnown RBP eCLIP22.07■■□□□ 1.124e-7■■■■■ 34.2
SMCO4-201ENST00000298966 MED7O43513 233 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 KIF5CO60282 957 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 TACC1O75410 805 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 GNA15P30679 374 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 NOP9Q86U38 636 aaKnown RBP22.07■■□□□ 1.12
SMCO4-201ENST00000298966 LRRTM3Q86VH5 581 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 TTC16Q8NEE8 873 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 SLC32A1Q9H598 525 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 LZTFL1Q9NQ48 299 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 LHX6Q9UPM6 363 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 PCNX2A6NKB5 2137 aa22.07■■□□□ 1.12
SMCO4-201ENST00000298966 DSPP15924 2871 aaKnown RBP22.06■■□□□ 1.12
SMCO4-201ENST00000298966 CILPO75339 1184 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 H2AFZP0C0S5 128 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 DHPSP49366 369 aaPredicted RBP22.06■■□□□ 1.12
SMCO4-201ENST00000298966 IRX4P78413 519 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 CYP27A1Q02318 531 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 NR1H3Q13133 447 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 STILQ15468 1287 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 KIAA1211LQ6NV74 962 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 H2AFVQ71UI9 128 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 RNF10Q8N5U6 811 aaKnown RBP22.06■■□□□ 1.12
SMCO4-201ENST00000298966 OSCP1Q8WVF1 389 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 PIGKQ92643 395 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 MMS19Q96T76 1030 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 UXTQ9UBK9 157 aaPredicted RBP22.06■■□□□ 1.12
SMCO4-201ENST00000298966 NEUROG3Q9Y4Z2 214 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 PAXBP1Q9Y5B6 917 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 SNX9Q9Y5X1 595 aa22.06■■□□□ 1.12
SMCO4-201ENST00000298966 HUS1O60921 280 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 RTN2O75298 545 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 PI4KAP42356 2102 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 FMO1Q01740 532 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 LMAN2Q12907 356 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 IFI16Q16666 785 aaKnown RBP22.05■■□□□ 1.12
SMCO4-201ENST00000298966 WSCD1Q658N2 575 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 ANO7Q6IWH7 933 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 SCARA5Q6ZMJ2 495 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 LIMS2Q7Z4I7 341 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 KIF18AQ8NI77 898 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 ZNF518BQ9C0D4 1074 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 ISCUQ9H1K1 167 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 TRPC7Q9HCX4 862 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 PCDHGC3Q9UN70 934 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 WNT6Q9Y6F9 365 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 CACNA1EQ15878 2313 aa22.05■■□□□ 1.12
SMCO4-201ENST00000298966 GON4LQ3T8J9 2241 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 ASPMQ8IZT6 3477 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 A0A0A6YYK5 440 aaPredicted RBP22.04■■□□□ 1.12
SMCO4-201ENST00000298966 LSM8O95777 96 aaKnown RBP22.04■■□□□ 1.12
SMCO4-201ENST00000298966 CKMP06732 381 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 USP17L7P0C7H9 530 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 CD58P19256 250 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 BCKDHBP21953 392 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 TSPY1Q01534 308 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 RING1Q06587 406 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 ZNF77Q15935 545 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 NFE2Q16621 373 aaPredicted RBP22.04■■□□□ 1.12
SMCO4-201ENST00000298966 RASSF3Q86WH2 238 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 TMEM86AQ8N2M4 240 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 STKLD1Q8NE28 680 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 OLIG1Q8TAK6 271 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 SLC20A1Q8WUM9 679 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 UBE2Q2Q8WVN8 375 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 TRIM11Q96F44 468 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 NT5C1AQ9BXI3 368 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 NUSAP1Q9BXS6 441 aaKnown RBP22.04■■□□□ 1.12
SMCO4-201ENST00000298966 PDCL3Q9H2J4 239 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 SMYD3Q9H7B4 428 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 SEPT11Q9NVA2 429 aaKnown RBP22.04■■□□□ 1.12
SMCO4-201ENST00000298966 EVLQ9UI08 416 aaPredicted RBP22.04■■□□□ 1.12
SMCO4-201ENST00000298966 CEP83Q9Y592 693 aa22.04■■□□□ 1.12
SMCO4-201ENST00000298966 TRAV19A0A0A6YYK7 116 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 A0A0U1RQJ8 604 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 ANKRD62A6NC57 917 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 THAP12O43422 761 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 HYAL3O43820 417 aaPredicted RBP22.03■■□□□ 1.12
SMCO4-201ENST00000298966 TMEM253P0C7T8 217 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 VDRP11473 427 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 CHRNB2P17787 502 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 GPR15P49685 360 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 GNG11P61952 73 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 RPL10AP62906 217 aaKnown RBP22.03■■□□□ 1.12
SMCO4-201ENST00000298966 USP4Q13107 963 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 EML3Q32P44 896 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 SCARA3Q6AZY7 606 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 SYT10Q6XYQ8 523 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 TTC30AQ86WT1 665 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 USP33Q8TEY7 942 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 ZNF606Q8WXB4 792 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 ELMO3Q96BJ8 720 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms