RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ATP11CQ8NB49 1132 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 ABTB1Q969K4 478 aaPredicted RBP16.12■□□□□ 0.17
UBAP1-201ENST00000297661 ZNF518BQ9C0D4 1074 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 PPCSQ9HAB8 311 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 PTPRFP10586 1907 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 MGAMO43451 1857 aa16.12■□□□□ 0.17
UBAP1-201ENST00000297661 MICAL2O94851 1124 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 BGNP21810 368 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 CDH5P33151 784 aaPredicted RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 DLG1Q12959 904 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 ITGA9Q13797 1035 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 HADHQ16836 314 aaKnown RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 ZNF667Q5HYK9 610 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 WDR78Q5VTH9 848 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 IER5Q5VY09 327 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 PPP1R2P3Q6NXS1 205 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 METTL7BQ6UX53 244 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 FBXO16Q8IX29 292 aaPredicted RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 SLC4A11Q8NBS3 891 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 CHST13Q8NET6 341 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 EPB41L1Q9H4G0 881 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 A0A0G2JLL6 359 aaPredicted RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 CAPN14A8MX76 684 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 GPR25O00155 361 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 KRT7P08729 469 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 VCLP18206 1134 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 POLR2BP30876 1174 aaKnown RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 AP3M2P53677 418 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 AQP4P55087 323 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 TAP1Q03518 808 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 MSLNQ13421 630 aaPredicted RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 GJC2Q5T442 439 aaPredicted RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 LPCAT4Q643R3 524 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 TRNP1Q6NT89 227 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 DARS2Q6PI48 645 aaKnown RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 PRRT2Q7Z6L0 340 aaPredicted RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 DHDDSQ86SQ9 333 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 FAM172AQ8WUF8 416 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 DCAKDQ8WVC6 231 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 PYDC1Q8WXC3 89 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 CPB2Q96IY4 423 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 CATSPER2Q96P56 530 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 TRIM56Q9BRZ2 755 aaKnown RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 CDT1Q9H211 546 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 DDX18Q9NVP1 670 aaKnown RBP16.11■□□□□ 0.17
UBAP1-201ENST00000297661 STRIP2Q9ULQ0 834 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 USP18Q9UMW8 372 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 SIP14410 1827 aa16.11■□□□□ 0.17
UBAP1-201ENST00000297661 VILLO15195 856 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 FKBP6O75344 327 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 PTPN7P35236 360 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 RGS7P49802 495 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 CDH6P55285 790 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 YWHAGP61981 247 aaKnown RBP eCLIP16.1■□□□□ 0.17
UBAP1-201ENST00000297661 JADE1Q6IE81 842 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 LBX2Q6XYB7 198 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 B3GNT6Q6ZMB0 384 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 POLNQ7Z5Q5 900 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 TTC17Q96AE7 1141 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 CFAP36Q96G28 342 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 SERAC1Q96JX3 654 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 HEXIM2Q96MH2 286 aaKnown RBP16.1■□□□□ 0.17
UBAP1-201ENST00000297661 GPR20Q99678 358 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 PPARGC1AQ9UBK2 798 aaKnown RBP16.1■□□□□ 0.17
UBAP1-201ENST00000297661 KCNH4Q9UQ05 1017 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 LACTBL1A8MY62 500 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 KBTBD13C9JR72 458 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 E5RJQ4 531 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 SPECC1L-ADORA2AF8WAN1 911 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 PHBP35232 272 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 GTF2A2P52657 109 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 MTA1Q13330 715 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 DPYSL3Q14195 570 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 PDK3Q15120 406 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 KBTBD12Q3ZCT8 623 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 EFCAB12Q6NXP0 572 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 SCYL2Q6P3W7 929 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 RBM44Q6ZP01 1051 aaKnown RBP16.1■□□□□ 0.17
UBAP1-201ENST00000297661 PDIK1LQ8N165 341 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 C12orf29Q8N999 325 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 ADPGKQ9BRR6 497 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 ACSS3Q9H6R3 686 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 RPF1Q9H9Y2 349 aaKnown RBP16.1■□□□□ 0.17
UBAP1-201ENST00000297661 S100A14Q9HCY8 104 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 RNF19AQ9NV58 838 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 PDHXO00330 501 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 TRPA1O75762 1119 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 HNRNPCP07910 306 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■□□□□ 10.7
UBAP1-201ENST00000297661 PTPN11Q06124 597 aaPredicted RBP16.1■□□□□ 0.17
UBAP1-201ENST00000297661 FAAP100Q0VG06 881 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 MMEL1Q495T6 779 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 DNAL1Q4LDG9 190 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 DUS1LQ6P1R4 473 aaKnown RBP16.1■□□□□ 0.17
UBAP1-201ENST00000297661 ADGRG6Q86SQ4 1221 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 PRPF39Q86UA1 669 aaKnown RBP16.1■□□□□ 0.17
UBAP1-201ENST00000297661 GSTCDQ8NEC7 633 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 SHKBP1Q8TBC3 707 aa16.1■□□□□ 0.17
UBAP1-201ENST00000297661 MZB1Q8WU39 189 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms