RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 RAP1GAPP47736 663 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 NOMO3P69849 1222 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 PIGHQ14442 188 aaPredicted RBP17.19■□□□□ 0.34
SBSPON-201ENST00000297354 RPS6KA2Q15349 733 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 DCAF4Q8WV16 495 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 HEXIM2Q96MH2 286 aaKnown RBP17.19■□□□□ 0.34
SBSPON-201ENST00000297354 PKP2Q99959 881 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 SNX25Q9H3E2 840 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 NOL11Q9H8H0 719 aaKnown RBP17.19■□□□□ 0.34
SBSPON-201ENST00000297354 POLR1BQ9H9Y6 1135 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 AVENQ9NQS1 362 aaPredicted RBP17.19■□□□□ 0.34
SBSPON-201ENST00000297354 TJP2Q9UDY2 1190 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 FER1L4A9Z1Z3 1794 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 WDR27A2RRH5 827 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 POLRMTO00411 1230 aaKnown RBP17.19■□□□□ 0.34
SBSPON-201ENST00000297354 DNAJA2O60884 412 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 USP12O75317 370 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 TGDSO95455 350 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 TBCCQ15814 346 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 Q3C1V9 767 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 C16orf89Q6UX73 402 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 METTL25Q8N6Q8 603 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 JOSD2Q8TAC2 188 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 CNDP1Q96KN2 507 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 PRICKLE1Q96MT3 831 aaPredicted RBP17.19■□□□□ 0.34
SBSPON-201ENST00000297354 MTG1Q9BT17 334 aaPredicted RBP17.19■□□□□ 0.34
SBSPON-201ENST00000297354 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 MYH11P35749 1972 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 DDTLA6NHG4 134 aaPredicted RBP17.19■□□□□ 0.34
SBSPON-201ENST00000297354 AP3B1O00203 1094 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 E2F6O75461 281 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 CPA3P15088 417 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 PDGFRAP16234 1089 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 ITGAXP20702 1163 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 HMOX2P30519 316 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 KLF1Q13351 362 aaPredicted RBP17.19■□□□□ 0.34
SBSPON-201ENST00000297354 BFSP2Q13515 415 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 TATDN1Q6P1N9 297 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 CPNE9Q8IYJ1 553 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 OFCC1Q8IZS5 231 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 SLC7A5P1Q8MH63 180 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 TDRD5Q8NAT2 981 aaKnown RBP17.19■□□□□ 0.34
SBSPON-201ENST00000297354 MAML3Q96JK9 1138 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 FAM49BQ9NUQ9 324 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 MT-ND1P03886 318 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 ARHGEF16Q5VV41 709 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 TMEM214Q6NUQ4 689 aaKnown RBP17.18■□□□□ 0.34
SBSPON-201ENST00000297354 TMEM53Q6P2H8 277 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 HPS1Q92902 700 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 GPATCH1Q9BRR8 931 aaKnown RBP17.18■□□□□ 0.34
SBSPON-201ENST00000297354 TASP1Q9H6P5 420 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 M0QYV0 167 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 PSMD12O00232 456 aaPredicted RBP17.18■□□□□ 0.34
SBSPON-201ENST00000297354 ME2P23368 584 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 GARSP41250 739 aaKnown RBP17.18■□□□□ 0.34
SBSPON-201ENST00000297354 YAP1P46937 504 aaKnown RBP17.18■□□□□ 0.34
SBSPON-201ENST00000297354 ZBTB17Q13105 803 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 POTEHQ6S545 545 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 ENOSF1Q7L5Y1 443 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 SMYD1Q8NB12 490 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 COQ10BQ9H8M1 238 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 COG4Q9H9E3 785 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 WDR41Q9HAD4 459 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 PTPRHQ9HD43 1115 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 CYP3A7-CYP3A51PA0A087WV96 503 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 ZNF839A8K0R7 811 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 MTA2O94776 668 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 ERVK-10P10266 1014 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 FOXD4Q12950 439 aaPredicted RBP17.18■□□□□ 0.34
SBSPON-201ENST00000297354 KLF10Q13118 480 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 PITRM1Q5JRX3 1037 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 C1QTNF12Q5T7M4 302 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 KDELC2Q7Z4H8 507 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 LINC00116Q8NCU8 138 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 DGKBQ9Y6T7 804 aa17.18■□□□□ 0.34
SBSPON-201ENST00000297354 A0A1W2PPW3 197 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 TIPRLO75663 272 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 LDHAP00338 332 aaKnown RBP17.17■□□□□ 0.34
SBSPON-201ENST00000297354 THRAP10827 490 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 GRIA1P42261 906 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 HALP42357 657 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 PGGT1BP53609 377 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 LSM3P62310 102 aaKnown RBP17.17■□□□□ 0.34
SBSPON-201ENST00000297354 RNF19BQ6ZMZ0 732 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 RAVER1Q8IY67 606 aaKnown RBP17.17■□□□□ 0.34
SBSPON-201ENST00000297354 SIX6OS1Q8N1H7 587 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 SPATA6LQ8N4H0 392 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 LRTOMTQ8WZ04 291 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 MKL1Q969V6 931 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 POLR3FQ9H1D9 316 aaPredicted RBP17.17■□□□□ 0.34
SBSPON-201ENST00000297354 CCDC167Q9P0B6 97 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 HSFX1Q9UBD0 423 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 ATP11BQ9Y2G3 1177 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 SNCAIPQ9Y6H5 919 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 PSMD10O75832 226 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 CDH8P55286 799 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 SLC12A1Q13621 1099 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 PLCL1Q15111 1095 aa17.17■□□□□ 0.34
SBSPON-201ENST00000297354 KIF19Q2TAC6 998 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms