RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 ARFGAP1Q8N6T3 406 aa28.87■■■□□ 2.21
CHCHD4-201ENST00000295767 TPCN2Q8NHX9 752 aa28.87■■■□□ 2.21
CHCHD4-201ENST00000295767 WBP2Q969T9 261 aa28.87■■■□□ 2.21
CHCHD4-201ENST00000295767 SLC39A13Q96H72 371 aa28.87■■■□□ 2.21
CHCHD4-201ENST00000295767 TRMT1Q9NXH9 659 aaKnown RBP28.87■■■□□ 2.21
CHCHD4-201ENST00000295767 BUB1BO60566 1050 aaPredicted RBP28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 STC2O76061 302 aa28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 PROSCO94903 275 aa28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 MOCS3O95396 460 aa28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 F9P00740 461 aa28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 FCARP24071 287 aa28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 KCNQ1P51787 676 aa28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 KPNA1P52294 538 aaPredicted RBP28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 CPNE8Q86YQ8 564 aa28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 ST13P5Q8NFI4 369 aaPredicted RBP28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 SH3RF2Q8TEC5 729 aa28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 ACSF2Q96CM8 615 aaPredicted RBP28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 FCRL2Q96LA5 508 aaPredicted RBP28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 LCMT1Q9UIC8 334 aa28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 FAM50BQ9Y247 325 aa28.86■■■□□ 2.21
CHCHD4-201ENST00000295767 KIF26AQ9ULI4 1882 aaPredicted RBP28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 USP27XA6NNY8 438 aa28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 LEFTY2O00292 366 aa28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 VIPR2P41587 438 aa28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 ACAP1Q15027 740 aa28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 TDRD5Q8NAT2 981 aaKnown RBP28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 TTC16Q8NEE8 873 aa28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 RIN3Q8TB24 985 aa28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 RSPRY1Q96DX4 576 aa28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 TRPV4Q9HBA0 871 aa28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 EPS15L1Q9UBC2 864 aa28.85■■■□□ 2.21
CHCHD4-201ENST00000295767 C2CD4DB7Z1M9 353 aa28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 LRCH4O75427 683 aa28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 RNF8O76064 485 aa28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 CXCR3P49682 368 aa28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 RING1Q06587 406 aa28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 ZC3H12AQ5D1E8 599 aaKnown RBP28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 FAM131BQ86XD5 332 aa28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 CCAR2Q8N163 923 aaKnown RBP28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 CELF5Q8N6W0 485 aaKnown RBP28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 PLD4Q96BZ4 506 aa28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 GOLPH3Q9H4A6 298 aa28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 KIF9Q9HAQ2 790 aa28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 CFAP97Q9P2B7 532 aa28.84■■■□□ 2.21
CHCHD4-201ENST00000295767 USP4Q13107 963 aa28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 SND1Q7KZF4 910 aaKnown RBP eCLIP28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 DDX42Q86XP3 938 aaKnown RBP eCLIP28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 RNF10Q8N5U6 811 aaKnown RBP28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 RNF34Q969K3 372 aa28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 CALR3Q96L12 384 aaKnown RBP28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 TCF3P15923 654 aa28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 MAN1A1P33908 653 aa28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 ZNF77Q15935 545 aa28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 IFI16Q16666 785 aaKnown RBP28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 RPGRIP1Q96KN7 1286 aa28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 CAPN6Q9Y6Q1 641 aa28.83■■■□□ 2.21
CHCHD4-201ENST00000295767 CCR1P32246 355 aa28.82■■■□□ 2.2
CHCHD4-201ENST00000295767 PPP2R5DQ14738 602 aa28.82■■■□□ 2.2
CHCHD4-201ENST00000295767 TANGO2Q6ICL3 276 aa28.82■■■□□ 2.2
CHCHD4-201ENST00000295767 C11orf63Q6NUN7 778 aa28.82■■■□□ 2.2
CHCHD4-201ENST00000295767 SCYL2Q6P3W7 929 aa28.82■■■□□ 2.2
CHCHD4-201ENST00000295767 LRRC3BQ96PB8 259 aa28.82■■■□□ 2.2
CHCHD4-201ENST00000295767 WDCPQ9H6R7 721 aa28.82■■■□□ 2.2
CHCHD4-201ENST00000295767 ZFP14Q9HCL3 533 aa28.82■■■□□ 2.2
CHCHD4-201ENST00000295767 NR2E1Q9Y466 385 aa28.82■■■□□ 2.2
CHCHD4-201ENST00000295767 HYOU1Q9Y4L1 999 aa28.82■■■□□ 2.2
CHCHD4-201ENST00000295767 GRID2IPA4D2P6 1211 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 SCAMP3O14828 347 aaKnown RBP28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 GREM1O60565 184 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 KLKB1P03952 638 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 TCF4P15884 667 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 MIPP30301 263 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 CORO1AP31146 461 aaKnown RBP28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 AAK1Q2M2I8 961 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 NUGGCQ68CJ6 796 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 CC2D1AQ6P1N0 951 aaPredicted RBP28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 PARM1Q6UWI2 310 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 DAAM2Q86T65 1068 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 KIAA1524Q8TCG1 905 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 FGF14Q92915 247 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 ANLNQ9NQW6 1124 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 SH3BP1Q9Y3L3 701 aa28.81■■■□□ 2.2
CHCHD4-201ENST00000295767 APOEP02649 317 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 SLC2A3P11169 496 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 PCK1P35558 622 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 BRMS1LQ5PSV4 323 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 UNC45BQ8IWX7 931 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 CCDC185Q8N715 623 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 LRRC57Q8N9N7 239 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 PEBP4Q96S96 227 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 TKTL2Q9H0I9 626 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 TMPRSS4Q9NRS4 437 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 TMEM51Q9NW97 253 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 ARHGEF38Q9NXL2 777 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 OBP2AQ9NY56 170 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 HEPACAM2A8MVW5 462 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 KCNU1A8MYU2 1149 aa28.8■■■□□ 2.2
CHCHD4-201ENST00000295767 I6L893 689 aaPredicted RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms