RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 BMT2Q1RMZ1 405 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 SPDYCQ5MJ68 293 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 GRAMD4Q6IC98 578 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 HTR3DQ70Z44 454 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 C12orf56Q8IXR9 622 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 MINDY1Q8N5J2 469 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 TRIML1Q8N9V2 468 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 IPO4Q8TEX9 1081 aaKnown RBP9.8□□□□□ -0.84
CNOT9-202ENST00000295701 INTS4Q96HW7 963 aaKnown RBP9.8□□□□□ -0.84
CNOT9-202ENST00000295701 TWNKQ96RR1 684 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 BBS2Q9BXC9 721 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 NACA2Q9H009 215 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 CUEDC2Q9H467 287 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 SLC32A1Q9H598 525 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 DMAC2Q9NW81 257 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 CACNA2D2Q9NY47 1150 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 SERTAD1Q9UHV2 236 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 STARD13Q9Y3M8 1113 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 PTPRBP23467 1997 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 ATP8B3O60423 1300 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 UBE4BO95155 1302 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 FREM2Q5SZK8 3169 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 NBEAQ8NFP9 2946 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 A0A1W2PQH9 124 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 SH3BP5O60239 455 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 OPHN1O60890 802 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 SERPINF2P08697 491 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 TUBP50607 506 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 ATXN3P54252 364 aaPredicted RBP9.79□□□□□ -0.84
CNOT9-202ENST00000295701 SNRPFP62306 86 aaKnown RBP9.79□□□□□ -0.84
CNOT9-202ENST00000295701 CLDN10P78369 228 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 INSM1Q01101 510 aaPredicted RBP9.79□□□□□ -0.84
CNOT9-202ENST00000295701 GFPT1Q06210 699 aaPredicted RBP9.79□□□□□ -0.84
CNOT9-202ENST00000295701 COL9A2Q14055 689 aaPredicted RBP9.79□□□□□ -0.84
CNOT9-202ENST00000295701 C1orf220Q5T0J3 134 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 SLC36A4Q6YBV0 504 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 CHPFQ8IZ52 775 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 CRYBG2Q8N1P7 616 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 HDDC3Q8N4P3 179 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 PNPLA1Q8N8W4 532 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 KIAA0895Q8NCT3 520 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 ZCCHC14Q8WYQ9 949 aaKnown RBP9.79□□□□□ -0.84
CNOT9-202ENST00000295701 TNIP3Q96KP6 325 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 HSPA12BQ96MM6 686 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 ZNF396Q96N95 335 aaPredicted RBP9.79□□□□□ -0.84
CNOT9-202ENST00000295701 KCTD10Q9H3F6 313 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 APOBEC3GQ9HC16 384 aaKnown RBP9.79□□□□□ -0.84
CNOT9-202ENST00000295701 CSNK1G1Q9HCP0 422 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 TLR8Q9NR97 1041 aaKnown RBP9.79□□□□□ -0.84
CNOT9-202ENST00000295701 COMMD8Q9NX08 183 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 PCDHA7Q9UN72 937 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 MSRB2Q9Y3D2 182 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 ADAMTS20P59510 1910 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 ATRXP46100 2492 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 PKD1L2Q7Z442 2459 aa9.79□□□□□ -0.84
CNOT9-202ENST00000295701 PVALEFA0A1B0GWK0 134 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 UPK3BL1B0FP48 263 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 UPK3BL2E5RIL1 263 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 CACNG3O60359 315 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 YEATS4O95619 227 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 HLA-DRAP01903 254 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 KLKB1P03952 638 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 RARGP13631 454 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 ACO1P21399 889 aaKnown RBP9.78□□□□□ -0.84
CNOT9-202ENST00000295701 ATP5C1P36542 298 aaKnown RBP9.78□□□□□ -0.84
CNOT9-202ENST00000295701 ASPAP45381 313 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 RING1Q06587 406 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 ZACNQ401N2 412 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 KIAA1324Q6UXG2 1013 aaKnown RBP9.78□□□□□ -0.84
CNOT9-202ENST00000295701 CLEC20AQ6ZU45 233 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 SV2AQ7L0J3 742 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 TRMT11Q7Z4G4 463 aaKnown RBP9.78□□□□□ -0.84
CNOT9-202ENST00000295701 SCD5Q86SK9 330 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 CCDC116Q8IYX3 515 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 RGL4Q8IZJ4 473 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 MEIOBQ8N635 442 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 CEP76Q8TAP6 659 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 ZNF419Q96HQ0 510 aaPredicted RBP9.78□□□□□ -0.84
CNOT9-202ENST00000295701 MRGPRX1Q96LB2 322 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 XPO6Q96QU8 1125 aaKnown RBP9.78□□□□□ -0.84
CNOT9-202ENST00000295701 GABRG3Q99928 467 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 DUSP9Q99956 384 aaKnown RBP9.78□□□□□ -0.84
CNOT9-202ENST00000295701 MARK1Q9P0L2 795 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 CGNQ9P2M7 1197 aaKnown RBP9.78□□□□□ -0.84
CNOT9-202ENST00000295701 SCML2Q9UQR0 700 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 NEUROG3Q9Y4Z2 214 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 TMEM131Q92545 1883 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 CKAP5Q14008 2032 aa9.78□□□□□ -0.84
CNOT9-202ENST00000295701 CELSR3Q9NYQ7 3312 aa9.77□□□□□ -0.84
CNOT9-202ENST00000295701 KCNJ18B7U540 433 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 H3BM21 787 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 K7ELQ4 463 aaPredicted RBP9.77□□□□□ -0.85
CNOT9-202ENST00000295701 GJB3O75712 270 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 STC2O76061 302 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 KIF20AO95235 890 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 ASS1P00966 412 aaKnown RBP9.77□□□□□ -0.85
CNOT9-202ENST00000295701 NR3C1P04150 777 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 CAPNS1P04632 268 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 HMBSP08397 361 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms