RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 MSH2P43246 934 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 LHX1P48742 406 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 DEUP1Q05D60 604 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 NR1H3Q13133 447 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 FAM72AQ5TYM5 149 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 FAM72DQ6L9T8 149 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 ADGRD1Q6QNK2 874 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 FAM72BQ86X60 149 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 DCAKDQ8WVC6 231 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 EDEM1Q92611 657 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 NT5C3BQ969T7 300 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 CAPN7Q9Y6W3 813 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 DNM1LO00429 736 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 LPIN1Q14693 890 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 SLC1A5Q15758 541 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 HEATR6Q6AI08 1181 aaKnown RBP19.96■□□□□ 0.79
BRAF-201ENST00000288602 FAM47EQ6ZV65 393 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 RTP3Q9BQQ7 232 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 RNF186Q9NXI6 227 aa19.96■□□□□ 0.79
BRAF-201ENST00000288602 I6L893 689 aaPredicted RBP19.95■□□□□ 0.78
BRAF-201ENST00000288602 FAM155BO75949 473 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 ITGB1P05556 798 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 NCAM1P13591 858 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 YY1P25490 414 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 KLHL38Q2WGJ6 581 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 DENND5BQ6ZUT9 1274 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 TMEM86AQ8N2M4 240 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 RNF139Q8WU17 664 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 TMEM209Q96SK2 561 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 NSRP1Q9H0G5 558 aaKnown RBP19.95■□□□□ 0.78
BRAF-201ENST00000288602 PIH1D1Q9NWS0 290 aaKnown RBP19.95■□□□□ 0.78
BRAF-201ENST00000288602 STAP1Q9ULZ2 295 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 TMEM88BA6NKF7 163 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 ZNF487B1APH4 448 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 SNX3O60493 162 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 ASMTLO95671 621 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 ATP2A2P16615 1042 aaKnown RBP19.95■□□□□ 0.78
BRAF-201ENST00000288602 ZFXP17010 805 aaPredicted RBP19.95■□□□□ 0.78
BRAF-201ENST00000288602 NR2C2P49116 596 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 DAOAP59103 153 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 PPP1R21Q6ZMI0 780 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 VPS52Q8N1B4 723 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 MPP5Q8N3R9 675 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 ANKS4BQ8N8V4 417 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 DENND1AQ8TEH3 1009 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 MAGEB18Q96M61 343 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 QKIQ96PU8 341 aaKnown RBP eCLIP19.95■□□□□ 0.785e-13■■■■□ 22.2
BRAF-201ENST00000288602 SLC2A13Q96QE2 648 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 NOD1Q9Y239 953 aa19.95■□□□□ 0.78
BRAF-201ENST00000288602 TAC1P20366 129 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 AP1B1Q10567 949 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 MRPL10Q7Z7H8 261 aaKnown RBP19.94■□□□□ 0.78
BRAF-201ENST00000288602 TFB1MQ8WVM0 346 aaKnown RBP19.94■□□□□ 0.78
BRAF-201ENST00000288602 CCT6BQ92526 530 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 MYLPFQ96A32 169 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 THOC1Q96FV9 657 aaKnown RBP19.94■□□□□ 0.78
BRAF-201ENST00000288602 DHRS4Q9BTZ2 278 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 SEPT10Q9P0V9 454 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 TYROBPO43914 113 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 GCATO75600 419 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 BDNFP23560 247 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 CCSAPQ6IQ19 270 aaPredicted RBP19.94■□□□□ 0.78
BRAF-201ENST00000288602 CGB2Q6NT52 195 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 BNIPLQ7Z465 357 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 MZB1Q8WU39 189 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 HTR3CQ8WXA8 447 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 PPM1EQ8WY54 764 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 SGSM3Q96HU1 749 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 CYTH2Q99418 400 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 PLAC1Q9HBJ0 212 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 TMLHEQ9NVH6 421 aa19.94■□□□□ 0.78
BRAF-201ENST00000288602 PRPF4O43172 522 aaKnown RBP eCLIP19.93■□□□□ 0.78
BRAF-201ENST00000288602 AOC2O75106 756 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 DGKIO75912 1065 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 IL9RQ01113 521 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 DNAJC3Q13217 504 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 XRCC4Q13426 336 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 ZNF534Q76KX8 674 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 CCNYQ8ND76 341 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 KLHDC9Q8NEP7 349 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 OLFM3Q96PB7 478 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 ZC3H7BQ9UGR2 993 aaKnown RBP19.93■□□□□ 0.78
BRAF-201ENST00000288602 CDH9Q9ULB4 789 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 MAD1L1Q9Y6D9 718 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 A0A0U1RQF3 1178 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 CXorf49A8MYA2 514 aaPredicted RBP19.93■□□□□ 0.78
BRAF-201ENST00000288602 HHLA1C9JL84 531 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 HGSO14964 777 aaPredicted RBP19.93■□□□□ 0.78
BRAF-201ENST00000288602 ANKRD20A2Q5SQ80 823 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 ANKRD20A1Q5TYW2 823 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 ANKRD20A3Q5VUR7 823 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 CD300LGQ6UXG3 332 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 CTAGE3PQ8IX95 158 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 SNX10Q9Y5X0 201 aa19.93■□□□□ 0.78
BRAF-201ENST00000288602 TSC2P49815 1807 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 CCT8L1PA6NM43 557 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 RPL9P32969 192 aaKnown RBP19.92■□□□□ 0.78
BRAF-201ENST00000288602 PTK7Q13308 1070 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 ITGA7Q13683 1181 aa19.92■□□□□ 0.78
BRAF-201ENST00000288602 FBXW10Q5XX13 1052 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms