RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 KRT1P04264 644 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 CCR1P32246 355 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 ADRA1BP35368 520 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 HYAL1Q12794 435 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 ARL13BQ3SXY8 428 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 ODF2Q5BJF6 829 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 TCEAL5Q5H9L2 206 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 TMEM184AQ6ZMB5 413 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 PSTKQ8IV42 348 aaKnown RBP19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 LEMD2Q8NC56 503 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 NOA1Q8NC60 698 aaKnown RBP19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 KCTD6Q8NC69 237 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 SPATA4Q8NEY3 305 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 TSC1Q92574 1164 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 RNF34Q969K3 372 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 ZNF707Q96C28 371 aaPredicted RBP19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 RBM41Q96IZ5 413 aaKnown RBP19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 PRDM12Q9H4Q4 367 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 RASAL2Q9UJF2 1139 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 LRRD1A4D1F6 860 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 C2orf78A6NCI8 922 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 PGRMC1O00264 195 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 MYL4P12829 197 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 KDELR1P24390 212 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 PPP2R5DQ14738 602 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 ERCC6LQ2NKX8 1250 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 BRMS1LQ5PSV4 323 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 SEL1L2Q5TEA6 688 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 AADACL2Q6P093 401 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 MIB1Q86YT6 1006 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 MRPS31Q92665 395 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 RNF25Q96BH1 459 aaPredicted RBP19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 SLC39A13Q96H72 371 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 GCNAQ96QF7 691 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 NACA2Q9H009 215 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 DZANK1Q9NVP4 752 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 AP4E1Q9UPM8 1137 aa19.64■□□□□ 0.73
PDLIM3-202ENST00000284770 C3orf70A6NLC5 250 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 PI4K2BG5E9Z4 385 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 RHOP08100 348 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 ARSEP51690 589 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 KPNA1P52294 538 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 TBX4P57082 545 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 COPS2P61201 443 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 SCAPQ12770 1279 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 GRIN2CQ14957 1233 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 TRIP4Q15650 581 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 ZC3H12AQ5D1E8 599 aaKnown RBP19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 CCDC50Q8IVM0 306 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 EFHBQ8N7U6 833 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 RNF38Q9H0F5 515 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 TKTL2Q9H0I9 626 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 ATXN3LQ9H3M9 355 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 SFXN1Q9H9B4 322 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 ANLNQ9NQW6 1124 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 GPATCH2LQ9NWQ4 482 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 ARHGEF38Q9NXL2 777 aa19.63■□□□□ 0.73
PDLIM3-202ENST00000284770 A0A1W2PRU2 124 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 SLC12A8A0AV02 714 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 SLC2A3P11169 496 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 CETN2P41208 172 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 C2orf54Q08AI8 447 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 PDK2Q15119 407 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 DPYSL2Q16555 572 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 CA9Q16790 459 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 TXNDC8Q6A555 127 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 MFSD7Q6UXD7 560 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 PDZD4Q76G19 769 aaPredicted RBP19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 C12orf76Q8N812 135 aaPredicted RBP19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 FAM71BQ8TC56 605 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 UBXN4Q92575 508 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 TRPC7Q9HCX4 862 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 TMPRSS4Q9NRS4 437 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 HBS1LQ9Y450 684 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 KCNU1A8MYU2 1149 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 I6L893 689 aaPredicted RBP19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 FGGP02679 453 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 L1CAMP32004 1257 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 CCR2P41597 374 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 CDH6P55285 790 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 TUBB4BP68371 445 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 RING1Q06587 406 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 EFHC2Q5JST6 749 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 TEX35Q5T0J7 233 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 SPOCD1Q6ZMY3 1216 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 ANKS1BQ7Z6G8 1248 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 GRASPQ7Z6J2 395 aaPredicted RBP19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 MAP7D3Q8IWC1 876 aa19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 FCRL2Q96LA5 508 aaPredicted RBP19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 DHX35Q9H5Z1 703 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 RBM12Q9NTZ6 932 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-202ENST00000284770 GLP2RO95838 553 aa19.61■□□□□ 0.73
PDLIM3-202ENST00000284770 OLFM2O95897 454 aa19.61■□□□□ 0.73
PDLIM3-202ENST00000284770 IGLV3-27P01718 113 aa19.61■□□□□ 0.73
PDLIM3-202ENST00000284770 CD48P09326 243 aa19.61■□□□□ 0.73
PDLIM3-202ENST00000284770 POU3F3P20264 500 aaPredicted RBP19.61■□□□□ 0.73
PDLIM3-202ENST00000284770 CDKN2BP42772 138 aa19.61■□□□□ 0.73
PDLIM3-202ENST00000284770 COG7P83436 770 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms