RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ELAC1Q9H777 363 aaKnown RBP11.39□□□□□ -0.59
GGPS1-201ENST00000282841 WDR6Q9NNW5 1121 aaKnown RBP11.39□□□□□ -0.59
GGPS1-201ENST00000282841 FZD10Q9ULW2 581 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 BPTFQ12830 3046 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 PRRC2BQ5JSZ5 2229 aaKnown RBP11.39□□□□□ -0.59
GGPS1-201ENST00000282841 SF3B1O75533 1304 aaKnown RBP eCLIP11.39□□□□□ -0.599e-6■■■■■ 68.9
GGPS1-201ENST00000282841 TLDC2A0PJX2 215 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 TNFRSF10BO14763 440 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 KCNN4O15554 427 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 DGKIO75912 1065 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 ENDOD1O94919 500 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 SLC29A2Q14542 456 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 HSP90B2PQ58FF3 399 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 KIAA1841Q6NSI8 718 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 C4orf50Q6ZRC1 276 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 MIB1Q86YT6 1006 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 IQCKQ8N0W5 287 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 CCDC89Q8N998 374 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 ART4Q93070 314 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 SNF8Q96H20 258 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 TOX2Q96NM4 488 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 SLC2A13Q96QE2 648 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 PIH1D1Q9NWS0 290 aaKnown RBP11.39□□□□□ -0.59
GGPS1-201ENST00000282841 GMIPQ9P107 970 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 APOC4-APOC2K7ER74 178 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 APOL1O14791 398 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 APOC2P02655 101 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 RDXP35241 583 aaKnown RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 RPL22P35268 128 aaKnown RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 HSPA9P38646 679 aaKnown RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 YWHAGP61981 247 aaKnown RBP eCLIP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 TAZQ16635 292 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 KYNUQ16719 465 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 TTMPQ5BVD1 217 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 SPRED2Q7Z698 418 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 MAP7D3Q8IWC1 876 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 CCDC110Q8TBZ0 833 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 DQX1Q8TE96 717 aaKnown RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 APBB2Q92870 758 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 RUFY1Q96T51 708 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 TTPALQ9BTX7 342 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 EPB41L4BQ9H329 900 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 CWH43Q9H720 699 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 MED4Q9NPJ6 270 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 CXXC1Q9P0U4 656 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 STAP1Q9ULZ2 295 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 MICAL3Q7RTP6 2002 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 FNDC1Q4ZHG4 1894 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 MCF2LO15068 1137 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 ATP8B1O43520 1251 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 PMS2P54278 862 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 BASP1P80723 227 aaKnown RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 BTBD8Q5XKL5 378 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 C16orf59Q7L2K0 433 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 LRRC43Q8N309 656 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 GRK7Q8WTQ7 553 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 ITFG2Q969R8 447 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 UBXN6Q9BZV1 441 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 WDCPQ9H6R7 721 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 SEPT10Q9P0V9 454 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 NLRC5Q86WI3 1866 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 WDR27A2RRH5 827 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 MTMR11A4FU01 709 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 PPP1R12AO14974 1030 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 AVILO75366 819 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 FAM163BP0C2L3 166 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 DESP17661 470 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 FGFR3P22607 806 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 ADRA1BP35368 520 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 SMAD1Q15797 465 aaKnown RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 DPYSL2Q16555 572 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 ZNF280DQ6N043 979 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 CNKSR3Q6P9H4 555 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 KCNT2Q6UVM3 1135 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 STRADAQ7RTN6 431 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 ANKMY2Q8IV38 441 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 RNF139Q8WU17 664 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 NT5C3BQ969T7 300 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 CELF6Q96J87 481 aaKnown RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 RABEP2Q9H5N1 569 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 ARHGEF4Q9NR80 690 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 PCDHB5Q9Y5E4 795 aa11.38□□□□□ -0.59
GGPS1-201ENST00000282841 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.38□□□□□ -0.59
GGPS1-201ENST00000282841 TRANK1O15050 2925 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 TRIM66O15016 1216 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 MFSD11O43934 449 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 CTCFP49711 727 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-201ENST00000282841 ROR1Q01973 937 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 NCBP2-AS2Q69YL0 99 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 RWDD4Q6NW29 188 aaKnown RBP11.37□□□□□ -0.59
GGPS1-201ENST00000282841 NECAB2Q7Z6G3 386 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 DCP1BQ8IZD4 617 aaKnown RBP11.37□□□□□ -0.59
GGPS1-201ENST00000282841 CCNYQ8ND76 341 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 FBXO22Q8NEZ5 403 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 TOP1MTQ969P6 601 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 ARMC5Q96C12 935 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 CYLDQ9NQC7 956 aa11.37□□□□□ -0.59
GGPS1-201ENST00000282841 LCMT1Q9UIC8 334 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms