RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 FAM131BQ86XD5 332 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 RELL1Q8IUW5 271 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 P3H4Q92791 437 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 IGSF21Q96ID5 467 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 SLC2A13Q96QE2 648 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 TMEM209Q96SK2 561 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 PKMYT1Q99640 499 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 SAYSD1Q9NPB0 183 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 TMLHEQ9NVH6 421 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 FYNP06241 537 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 MAGEA4P43358 317 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 YWHAZP63104 245 aaKnown RBP21.75■■□□□ 1.07
YBX3-202ENST00000279550 HTRA4P83105 476 aaPredicted RBP21.75■■□□□ 1.07
YBX3-202ENST00000279550 AUHQ13825 339 aaKnown RBP21.75■■□□□ 1.07
YBX3-202ENST00000279550 DCAF6Q58WW2 860 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 BNIPLQ7Z465 357 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 VSIG1Q86XK7 387 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 PYROXD2Q8N2H3 581 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 CPT1BQ92523 772 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 B3GALT6Q96L58 329 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 ZNF558Q96NG5 402 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 NPY6RQ99463 290 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 TMPRSS4Q9NRS4 437 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 SHOC2Q9UQ13 582 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 SLC4A7Q9Y6M7 1214 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 ZNF487B1APH4 448 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 H7C0C1 242 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 RASGRF2O14827 1237 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 MAP3K6O95382 1288 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 EFEMP2O95967 443 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 LAG3P18627 525 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 TGM2P21980 687 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 ATP5OP48047 213 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 DAOAP59103 153 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 PPP2R2AP63151 447 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 MRPL58Q14197 206 aaKnown RBP21.75■■□□□ 1.07
YBX3-202ENST00000279550 FASTKD3Q14CZ7 662 aaKnown RBP21.75■■□□□ 1.07
YBX3-202ENST00000279550 LONRF1Q17RB8 773 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 C6orf118Q5T5N4 469 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 LRRN4Q8WUT4 740 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 NT5C3BQ969T7 300 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 ZBED2Q9BTP6 218 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 SLC12A6Q9UHW9 1150 aa21.75■■□□□ 1.07
YBX3-202ENST00000279550 TCRBV7S3A2A0A539 114 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 NOS2P35228 1153 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 MAPRE1Q15691 268 aaKnown RBP21.74■■□□□ 1.07
YBX3-202ENST00000279550 RAB41Q5JT25 222 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 LRRTM3Q86VH5 581 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 COLGALT1Q8NBJ5 622 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 SLC9A7Q96T83 725 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 USP29Q9HBJ7 922 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 FZD10Q9ULW2 581 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 NAALADL1Q9UQQ1 740 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 MFHAS1Q9Y4C4 1052 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 INSL6Q9Y581 213 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 HEY1Q9Y5J3 304 aa21.74■■□□□ 1.07
YBX3-202ENST00000279550 VWA8A3KMH1 1905 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 SYNJ2BP-COX16A0A087WUM0 186 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 CARNS1A5YM72 827 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 YJEFN3A6XGL0 299 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 E7ENQ6 273 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 GOLGA8MH3BSY2 632 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 EIF3HO15372 352 aaKnown RBP eCLIP21.73■■□□□ 1.07
YBX3-202ENST00000279550 RGS16O15492 202 aaPredicted RBP21.73■■□□□ 1.07
YBX3-202ENST00000279550 BANF1O75531 89 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 MDH1P40925 334 aaKnown RBP21.73■■□□□ 1.07
YBX3-202ENST00000279550 TNFAIP8L3Q5GJ75 292 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 RTP2Q5QGT7 225 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 HP1BP3Q5SSJ5 553 aaPredicted RBP21.73■■□□□ 1.07
YBX3-202ENST00000279550 ZNF280DQ6N043 979 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 BHLHA9Q7RTU4 235 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 TAS1R1Q7RTX1 841 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 PPIL6Q8IXY8 311 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 RNF168Q8IYW5 571 aaPredicted RBP21.73■■□□□ 1.07
YBX3-202ENST00000279550 SLC39A11Q8N1S5 342 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 NAT8LQ8N9F0 302 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 SMARCD1Q96GM5 515 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 CSPG4P5Q96PW8 444 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 TTPALQ9BTX7 342 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 CWC15Q9P013 229 aaKnown RBP21.73■■□□□ 1.07
YBX3-202ENST00000279550 COX16Q9P0S2 106 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 USP3Q9Y6I4 520 aa21.73■■□□□ 1.07
YBX3-202ENST00000279550 FBXO21O94952 628 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 CTXN3Q4LDR2 81 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 LEKR1Q6ZMV7 388 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 HERC6Q8IVU3 1022 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 PHOSPHO2Q8TCD6 241 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 VN1R3Q9BXE9 311 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 ROPN1BQ9BZX4 212 aaPredicted RBP21.72■■□□□ 1.07
YBX3-202ENST00000279550 ZCWPW1Q9H0M4 648 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 MTIF3Q9H2K0 278 aaKnown RBP21.72■■□□□ 1.07
YBX3-202ENST00000279550 RABEP2Q9H5N1 569 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 ROPN1Q9HAT0 212 aaPredicted RBP21.72■■□□□ 1.07
YBX3-202ENST00000279550 ETNK2Q9NVF9 386 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 TMEM63AO94886 807 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 USP17L7P0C7H9 530 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 ATP2A2P16615 1042 aaKnown RBP21.72■■□□□ 1.07
YBX3-202ENST00000279550 GBE1Q04446 702 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 SLC10A2Q12908 348 aaPredicted RBP21.72■■□□□ 1.07
YBX3-202ENST00000279550 USP41Q3LFD5 358 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms