RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 C12orf76Q8N812 135 aaPredicted RBP13.81□□□□□ -0.2
ACER3-201ENST00000278544 IGFLR1Q9H665 355 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 WDR6Q9NNW5 1121 aaKnown RBP13.81□□□□□ -0.2
ACER3-201ENST00000278544 VANGL2Q9ULK5 521 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 TSC2P49815 1807 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 NRG2O14511 850 aaPredicted RBP13.81□□□□□ -0.2
ACER3-201ENST00000278544 FAM163BP0C2L3 166 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 ATF2P15336 505 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 EPHB2P29323 1055 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 PCK1P35558 622 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 SMAD1Q15797 465 aaKnown RBP13.81□□□□□ -0.2
ACER3-201ENST00000278544 BOLA3Q53S33 107 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 ANKRD20A8PQ5CZ79 823 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 EFHC2Q5JST6 749 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 TXNDC8Q6A555 127 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 CCDC26Q8TAB7 109 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 SLC22A12Q96S37 553 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 MTMR10Q9NXD2 777 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 DDX56Q9NY93 547 aaKnown RBP13.81□□□□□ -0.2
ACER3-201ENST00000278544 OR12D3Q9UGF7 316 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 USP3Q9Y6I4 520 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 GOLGA6L7A0A1B0GV03 622 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 RBP3P10745 1247 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 ADRA1BP35368 520 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 BMPR1AP36894 532 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 ADCY8P40145 1251 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 PTPN9P43378 593 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 EIF3EP60228 445 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 DARS2Q6PI48 645 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 TMCO3Q6UWJ1 677 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 CAPN12Q6ZSI9 719 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 DDX53Q86TM3 631 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 CFAP52Q8N1V2 620 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 CMASQ8NFW8 434 aaPredicted RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 FUBP3Q96I24 572 aaKnown RBP eCLIP13.8□□□□□ -0.2
ACER3-201ENST00000278544 RPGRIP1Q96KN7 1286 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 LGMNQ99538 433 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 CORO1BQ9BR76 489 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 YBX2Q9Y2T7 364 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 ZNF638Q14966 1978 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 COL4A6Q14031 1691 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 ARL4AP40617 200 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 RPL34P49207 117 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 KLF1Q13351 362 aaPredicted RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 BYSLQ13895 437 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 PM20D1Q6GTS8 502 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 DNAJB7Q7Z6W7 309 aaPredicted RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 P3H4Q92791 437 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 SLC2A13Q96QE2 648 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 SLITRK6Q9H5Y7 841 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 ABCC13Q9NSE7 274 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 UTP11Q9Y3A2 253 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 COL6A3P12111 3177 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 EEF2KO00418 725 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 ECEL1O95672 775 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 LINC00271P0C7V0 271 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 MYL4P12829 197 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 IRAK1P51617 712 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 VCPP55072 806 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 RFWD3Q6PCD5 774 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 MAATS1Q7Z4T9 603 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 MAP7D3Q8IWC1 876 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 UNC45BQ8IWX7 931 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 PQLC3Q8N755 202 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 GDPD5Q8WTR4 605 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 CSPG4P5Q96PW8 444 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 RNF157Q96PX1 679 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 PIH1D1Q9NWS0 290 aaKnown RBP13.8□□□□□ -0.2
ACER3-201ENST00000278544 ZNF446Q9NWS9 450 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 MARCH2Q9P0N8 246 aa13.8□□□□□ -0.2
ACER3-201ENST00000278544 GSCP56915 257 aaPredicted RBP13.79□□□□□ -0.2
ACER3-201ENST00000278544 NTHL1P78549 312 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 SLC10A2Q12908 348 aaPredicted RBP13.79□□□□□ -0.2
ACER3-201ENST00000278544 C14orf80Q86SX3 495 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 MON1AQ86VX9 555 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 HERVK_113Q902F9 699 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 AFF4Q9UHB7 1163 aaKnown RBP13.79□□□□□ -0.2
ACER3-201ENST00000278544 PTPRSQ13332 1948 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 CCDC188H7C350 402 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 TSPAN3O60637 253 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 PAGE1O75459 146 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 C8AP07357 584 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 EPCAMP16422 314 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 RPL21P46778 160 aaKnown RBP13.79□□□□□ -0.2
ACER3-201ENST00000278544 RPL10AP62906 217 aaKnown RBP13.79□□□□□ -0.2
ACER3-201ENST00000278544 HTRA4P83105 476 aaPredicted RBP13.79□□□□□ -0.2
ACER3-201ENST00000278544 TNS4Q8IZW8 715 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 C8orf48Q96LL4 319 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 C11orf84Q9BUA3 381 aaPredicted RBP13.79□□□□□ -0.2
ACER3-201ENST00000278544 ARFGAP3Q9NP61 516 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 ARGLU1Q9NWB6 273 aaPredicted RBP13.79□□□□□ -0.2
ACER3-201ENST00000278544 FZD10Q9ULW2 581 aa13.79□□□□□ -0.2
ACER3-201ENST00000278544 KCNK1O00180 336 aa13.78□□□□□ -0.2
ACER3-201ENST00000278544 DPYSL4O14531 572 aa13.78□□□□□ -0.2
ACER3-201ENST00000278544 PPM1AP35813 382 aa13.78□□□□□ -0.2
ACER3-201ENST00000278544 TPI1P60174 286 aa13.78□□□□□ -0.2
ACER3-201ENST00000278544 CBX2Q14781 532 aaPredicted RBP13.78□□□□□ -0.2
ACER3-201ENST00000278544 POLNQ7Z5Q5 900 aa13.78□□□□□ -0.2
ACER3-201ENST00000278544 PLD5Q8N7P1 536 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms