RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 CHCHD3Q9NX63 227 aaKnown RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 NAALADL1Q9UQQ1 740 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 C2CD2Q9Y426 696 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 SIGLEC16A6NMB1 481 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 RNF103O00237 685 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 ARL4DP49703 201 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 POTEAQ6S8J7 498 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 PTAR1Q7Z6K3 402 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 WNT8BQ93098 351 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 NAF1Q96HR8 494 aaKnown RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 TKTL2Q9H0I9 626 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 ATXN3LQ9H3M9 355 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 IL1RL2Q9HB29 575 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 CHST7Q9NS84 486 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 FAM32AQ9Y421 112 aaKnown RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 MAGEB16A2A368 324 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 TSPAN3O60637 253 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 FARP2O94887 1054 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 IKBKEQ14164 716 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 LRRC36Q1X8D7 754 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 C15orf59Q2T9L4 293 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 KATNAL2Q8IYT4 538 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 BAP1Q92560 729 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 STX18Q9P2W9 335 aaKnown RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 SPASTQ9UBP0 616 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 HEY2Q9UBP5 337 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 TRHDEQ9UKU6 1024 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 ROBO3Q96MS0 1386 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 GLTPD2A6NH11 291 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 TRIM16O95361 564 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 CCNE2O96020 404 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 KRT16P08779 473 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 MZF1P28698 734 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 SSTR1P30872 391 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 DUSP28Q4G0W2 176 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 PIGZQ86VD9 579 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 PRPF18Q99633 342 aaKnown RBP11.59□□□□□ -0.55
USP6NL-201ENST00000277575 SYNDIG1Q9H7V2 258 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 MARCH2Q9P0N8 246 aa11.59□□□□□ -0.55
USP6NL-201ENST00000277575 AKAP10O43572 662 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 RNASEH1O60930 286 aaKnown RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 AMHP03971 560 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 NPR3P17342 541 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 NCKAP1LP55160 1127 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 MTA1Q13330 715 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 KRT72Q14CN4 511 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 HIST2H2ACQ16777 129 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 HIST2H2AA3Q6FI13 130 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 ABHD15Q6UXT9 468 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 NLRP9Q7RTR0 991 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 CATSPER1Q8NEC5 780 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 RNPEPQ9H4A4 650 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 PIH1D1Q9NWS0 290 aaKnown RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 EVPLLA8MZ36 301 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 KDM1AO60341 852 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 FKBP9O95302 570 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 RBP1P09455 135 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 CPA3P15088 417 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 KDELR1P24390 212 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 ATP6V1E1P36543 226 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 FLT3LGP49771 235 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 STX5Q13190 355 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 MAMLD1Q13495 774 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 CSHL1Q14406 222 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 RRP1BQ14684 758 aaKnown RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 CNGA3Q16281 694 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 FAM110CQ1W6H9 321 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 FKBP9P1Q75LS8 142 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 SH3BP5LQ7L8J4 393 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 LGI2Q8N0V4 545 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 LPCAT1Q8NF37 534 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 SPATA20Q8TB22 786 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 SYT17Q9BSW7 474 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 ST3GAL5Q9UNP4 418 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 NFAT5O94916 1531 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 NCF1BA6NI72 391 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 NCF1CA8MVU1 366 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 RIPK2O43353 540 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 TOMM70O94826 608 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 TRUB2O95900 331 aaKnown RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 NCF1P14598 390 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 ARF4P18085 180 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 RBL1P28749 1068 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 SUGP1Q8IWZ8 645 aaKnown RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 MYO1HQ8N1T3 1032 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 EME1Q96AY2 570 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 UTP6Q9NYH9 597 aaKnown RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 MRPL42Q9Y6G3 142 aaKnown RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 GP5P40197 560 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 COPAP53621 1224 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 CRYBB1P53674 252 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-201ENST00000277575 FOXR2Q6PJQ5 311 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 MAGEB18Q96M61 343 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 OSBPL1AQ9BXW6 950 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 NCKIPSDQ9NZQ3 722 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 RAB21Q9UL25 225 aa11.58□□□□□ -0.56
USP6NL-201ENST00000277575 ZNF541Q9H0D2 1346 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 EIF4E1BA6NMX2 242 aaKnown RBP11.57□□□□□ -0.56
USP6NL-201ENST00000277575 GRK2P25098 689 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms