RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CDK16Q00536 496 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 FPGSQ05932 587 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 EEF1DP3Q658K8 133 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 CYP4V2Q6ZWL3 525 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 LRRC6Q86X45 466 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 WNT8BQ93098 351 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 SKA1Q96BD8 255 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 SCLYQ96I15 445 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 NSL1Q96IY1 281 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 NUDCD1Q96RS6 583 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 KLC2Q9H0B6 622 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 IFT122Q9HBG6 1241 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 KANSL3Q9P2N6 904 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 LACTBL1A8MY62 500 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 HAS3O00219 553 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 KPNA6O60684 536 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 ITGB3P05106 788 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 LGALS2P05162 132 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 NFICP08651 508 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 STAG3L1P0CL83 205 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 PDGFRAP16234 1089 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 EPHB2P29323 1055 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 YWHAGP61981 247 aaKnown RBP eCLIP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 MFSD10Q14728 455 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 SLC9A4Q6AI14 798 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 IGDCC3Q8IVU1 814 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 CEP120Q8N960 986 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 PTCD3Q96EY7 689 aaKnown RBP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 NAF1Q96HR8 494 aaKnown RBP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 SERAC1Q96JX3 654 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 HEXIM2Q96MH2 286 aaKnown RBP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 NLRP4Q96MN2 994 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 C7orf26Q96N11 449 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 TWNKQ96RR1 684 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 PEBP4Q96S96 227 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 IQCGQ9H095 443 aaKnown RBP13.38□□□□□ -0.27
C9orf3-201ENST00000277198 SMYD3Q9H7B4 428 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 HEY2Q9UBP5 337 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 ITGA11Q9UKX5 1188 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 C2CD2Q9Y426 696 aa13.38□□□□□ -0.27
C9orf3-201ENST00000277198 A0A1W2PPC1 479 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 WDR91A4D1P6 747 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 H7C0C1 242 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 MDM4O15151 490 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 B4GALT5O43286 388 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 C1QAP02745 245 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 SETSIPP0DME0 302 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 ATP5OP48047 213 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 SERPINB4P48594 390 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 OSTNP61366 133 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 TAF5Q15542 800 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 DBN1Q16643 649 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 JADE1Q6IE81 842 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 EFCAB12Q6NXP0 572 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 C4orf50Q6ZRC1 276 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 CYS1Q717R9 158 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 PLD5Q8N7P1 536 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 RFWD2Q8NHY2 731 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 RXFP2Q8WXD0 754 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 PTPRN2Q92932 1015 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 ZNF670Q9BS34 389 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 DENND2DQ9H6A0 471 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-201ENST00000277198 KCNK13Q9HB14 408 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 RAB6BQ9NRW1 208 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 KCNK4Q9NYG8 393 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 DCTN4Q9UJW0 460 aa13.37□□□□□ -0.27
C9orf3-201ENST00000277198 A0A0G2JND7 137 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 GOLGA8RI6L899 631 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 COPEO14579 308 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 APOL1O14791 398 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 CCNFP41002 786 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 RBP5P82980 135 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 KRT81Q14533 505 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 TAF11Q15544 211 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 ZNF484Q5JVG2 852 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 ATG16L1Q676U5 607 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 FAM109BQ6ICB4 259 aaPredicted RBP13.36□□□□□ -0.27
C9orf3-201ENST00000277198 ZDHHC17Q8IUH5 632 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 ARHGAP24Q8N264 748 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 HPDLQ96IR7 371 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 FAM111AQ96PZ2 611 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 ADAM33Q9BZ11 813 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 STOML1Q9UBI4 398 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 NKX1-2Q9UD57 310 aaPredicted RBP13.36□□□□□ -0.27
C9orf3-201ENST00000277198 GTF2IRD1Q9UHL9 959 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 SUFUQ9UMX1 484 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 KRT38O76015 456 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 SLC34A2O95436 690 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 PYGBP11216 843 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 NEFHP12036 1026 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 ZFXP17010 805 aaPredicted RBP13.36□□□□□ -0.27
C9orf3-201ENST00000277198 GM2AP17900 193 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 IL4RP24394 825 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 BCAR1P56945 870 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 YWHAZP63104 245 aaKnown RBP13.36□□□□□ -0.27
C9orf3-201ENST00000277198 ZBTB16Q05516 673 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 BLMHQ13867 455 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms