RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 SMYD2Q9NRG4 433 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 SACM1LQ9NTJ5 587 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 ZDHHC7Q9NXF8 308 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 ADA2Q9NZK5 511 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 NYAP2Q9P242 653 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 VPS51Q9UID3 782 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 SNCAIPQ9Y6H5 919 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 ARHGEF37A1IGU5 675 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 IPO5O00410 1097 aaKnown RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 ADAM23O75077 832 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 CLIC3O95833 236 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 PGGT1BP53609 377 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 BNIP3Q12983 259 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 CDO1Q16878 200 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 XKR9Q5GH70 373 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 N4BP2L1Q5TBK1 243 aaPredicted RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 PLEKHA7Q6IQ23 1121 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 KYAT3Q6YP21 454 aaKnown RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 SLC26A11Q86WA9 606 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 HEPHQ9BQS7 1158 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 ZNRF3Q9ULT6 936 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 SMCHD1A6NHR9 2005 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 SNHG28P0DPA3 235 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 CYP3A7P24462 503 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 PSMA2P25787 234 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 ITGADQ13349 1161 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 ITGA7Q13683 1181 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 STYK1Q6J9G0 422 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 LAYNQ6UX15 382 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 NAT8LQ8N9F0 302 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 KCTD6Q8NC69 237 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 PIWIL2Q8TC59 973 aaKnown RBP13.22□□□□□ -0.29
HERC6-202ENST00000273960 PPP1R10Q96QC0 940 aaKnown RBP13.22□□□□□ -0.29
HERC6-202ENST00000273960 NUF2Q9BZD4 464 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 UNKQ9C0B0 810 aaKnown RBP13.22□□□□□ -0.29
HERC6-202ENST00000273960 TBC1D22BQ9NU19 505 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 CNTN3Q9P232 1028 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 EPS15L1Q9UBC2 864 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 WDR37Q9Y2I8 494 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 SNX13Q9Y5W8 968 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 PLOD2O00469 737 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 LDHAP00338 332 aaKnown RBP13.22□□□□□ -0.29
HERC6-202ENST00000273960 PORP16435 677 aaPredicted RBP13.22□□□□□ -0.29
HERC6-202ENST00000273960 SREBF1P36956 1147 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 CXCL9Q07325 125 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 GPR107Q5VW38 600 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 CES3Q6UWW8 571 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 MON1BQ7L1V2 547 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 SNX29P2Q8IUI4 249 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 DEPDC1BQ8WUY9 529 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 CIB1Q99828 191 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 TBC1D23Q9NUY8 699 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 PCDHB2Q9Y5E7 798 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 A0A1W2PPW3 197 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 KLRG2A4D1S0 409 aaPredicted RBP13.22□□□□□ -0.29
HERC6-202ENST00000273960 ZBTB14O43829 449 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 EGFRP00533 1210 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 P4HBP07237 508 aaKnown RBP13.22□□□□□ -0.29
HERC6-202ENST00000273960 COX4I1P13073 169 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 RCVRNP35243 200 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 MS4A2Q01362 244 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 GNA12Q03113 381 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 KCNT2Q6UVM3 1135 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 SIAH1Q8IUQ4 282 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 C10orf107Q8IVU9 208 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 CHURC1Q8WUH1 139 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 ATP6V1E2Q96A05 226 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 C20orf96Q9NUD7 363 aaPredicted RBP13.22□□□□□ -0.29
HERC6-202ENST00000273960 PSMD13Q9UNM6 376 aa13.22□□□□□ -0.29
HERC6-202ENST00000273960 FUCA1P04066 466 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 BPGMP07738 259 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 CD19P15391 556 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 HMGB2P26583 209 aaKnown RBP13.21□□□□□ -0.29
HERC6-202ENST00000273960 CCR10P46092 362 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 IDH3AP50213 366 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 NME3Q13232 169 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 CEP55Q53EZ4 464 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 PERM1Q5SV97 790 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 TMEM198Q66K66 360 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 PACS1Q6VY07 963 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 ATG14Q6ZNE5 492 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 MARVELD2Q8N4S9 558 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 PLGRKTQ9HBL7 147 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 TMEM8AQ9HCN3 771 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 PSMD12O00232 456 aaPredicted RBP13.21□□□□□ -0.29
HERC6-202ENST00000273960 CCNT2O60583 730 aaKnown RBP13.21□□□□□ -0.29
HERC6-202ENST00000273960 HLA-DRAP01903 254 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 ZNF252P-AS1Q0IIN9 211 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 SPP2Q13103 211 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 AP3B2Q13367 1082 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 PDAP1Q13442 181 aaKnown RBP13.21□□□□□ -0.29
HERC6-202ENST00000273960 SEPT6Q14141 434 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 DPYSL3Q14195 570 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 TGFBIQ15582 683 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 EGFLAMQ63HQ2 1017 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 MPP5Q8N3R9 675 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 C7orf26Q96N11 449 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms