RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 TMEM237Q96Q45 408 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 C11orf84Q9BUA3 381 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 FRMD8Q9BZ67 464 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 MANSC1Q9H8J5 431 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 PLAC1Q9HBJ0 212 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 DCTN4Q9UJW0 460 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 NRCAMQ92823 1304 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 SMIM35A0A1B0GVV1 85 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 UGT1A9O60656 530 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 CD4P01730 458 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 C1QAP02745 245 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 TROVE2P10155 538 aaKnown RBP eCLIP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 NEFHP12036 1026 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 AMPD1P23109 780 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 SLC8A1P32418 973 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 MAGEA6P43360 314 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 SULT1E1P49888 294 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 SNX17Q15036 470 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 PREPLQ4J6C6 727 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 TTC39BQ5VTQ0 682 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 NCBP2-AS2Q69YL0 99 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 ZNF449Q6P9G9 518 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 KCNT2Q6UVM3 1135 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 ZNF534Q76KX8 674 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 NLRP9Q7RTR0 991 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 ADGRF2Q8IZF7 708 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 MPP5Q8N3R9 675 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 NETO2Q8NC67 525 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 APPL2Q8NEU8 664 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 MAGEC3Q8TD91 643 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 CENPIQ92674 756 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 RNF208Q9H0X6 261 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 UGT1A7Q9HAW7 530 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 UGT1A10Q9HAW8 530 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 UGT1A8Q9HAW9 530 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 SMYD2Q9NRG4 433 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.35□□□□□ -0.27
CPSF6-201ENST00000266679 HAO1Q9UJM8 370 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 MAD1L1Q9Y6D9 718 aa13.35□□□□□ -0.27
CPSF6-201ENST00000266679 SYNJ2BP-COX16A0A087WUM0 186 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 ZNF487B1APH4 448 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 INHAP05111 366 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 ZFXP17010 805 aaPredicted RBP13.34□□□□□ -0.27
CPSF6-201ENST00000266679 GOT1P17174 413 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 BGNP21810 368 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 TAF6P49848 677 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 SLC18A2Q05940 514 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 RIPK1Q13546 671 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 BMPR2Q13873 1038 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 UNC5AQ6ZN44 842 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 DENND5BQ6ZUT9 1274 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 OSTM1Q86WC4 334 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 LRRC6Q86X45 466 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 FAM131BQ86XD5 332 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 CRYBG2Q8N1P7 616 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 FAM149B1Q96BN6 582 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 VPS11Q9H270 941 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 SLC5A4Q9NY91 659 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 COX16Q9P0S2 106 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.34□□□□□ -0.27
CPSF6-201ENST00000266679 ZNF236Q9UL36 1845 aa13.34□□□□□ -0.27
CPSF6-201ENST00000266679 MBLAC1A4D2B0 266 aaPredicted RBP13.33□□□□□ -0.27
CPSF6-201ENST00000266679 SLC15A5A6NIM6 579 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 COPEO14579 308 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 TREHO43280 583 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 CSH1P0DML2 217 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 CSH2P0DML3 217 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 VAV1P15498 845 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 ETV4P43268 484 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 ACADSBP45954 432 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 CDC42EP1Q00587 391 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 ADIGQ0VDE8 80 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 TRIM32Q13049 653 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 SV2CQ496J9 727 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 TAF1BQ53T94 588 aaPredicted RBP13.33□□□□□ -0.27
CPSF6-201ENST00000266679 UBXN11Q5T124 520 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 TLK2Q86UE8 772 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 DEFB106AQ8N104 65 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 SLAIN1Q8ND83 568 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 MCUQ8NE86 351 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 TSSK1BQ9BXA7 367 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 IQCGQ9H095 443 aaKnown RBP13.33□□□□□ -0.27
CPSF6-201ENST00000266679 DTLQ9NZJ0 730 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 KANSL3Q9P2N6 904 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 ZFP69BQ9UJL9 534 aa13.33□□□□□ -0.27
CPSF6-201ENST00000266679 CLDN5O00501 218 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 GCATO75600 419 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 CBX6O95503 412 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 APOEP02649 317 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 MYL3P08590 195 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 DHRS4L1P0CG22 281 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 PRKCHP24723 683 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 ACAT1P24752 427 aaKnown RBP13.33□□□□□ -0.28
CPSF6-201ENST00000266679 AXLP30530 894 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 SCNN1AP37088 669 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 GRIA1P42261 906 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 PSEN2P49810 448 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 PLEKHG4Q58EX7 1191 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 OLFML2BQ68BL8 750 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms