RNA–Protein interactions for RNA: ENST00000263857.10

POLR1A-201, Transcript of RNA polymerase I subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1A, Length 12,749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-201ENST00000263857 CLOCKO15516 846 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 RTN3O95197 1032 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 HSD3B1P14060 373 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 MAGEA4P43358 317 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 IL18R1Q13478 541 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PAGE2BQ5JRK9 111 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 KDM7AQ6ZMT4 941 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 C3orf62Q6ZUJ4 267 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PGBD3Q8N328 593 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ZSCAN18Q8TBC5 510 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 MAP4K1Q92918 833 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 MTMR12Q9C0I1 747 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 JMJD4Q9H9V9 463 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 THAP1Q9NVV9 213 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 RAPGEF6Q8TEU7 1601 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 MAGEB16A2A368 324 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 LOC110117498-PIK3R3F6TDL0 507 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PCCAP05165 728 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 RARBP10826 455 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ADSLP30566 484 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ZMYM1Q5SVZ6 1142 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PIK3R3Q92569 461 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 USP7Q93009 1102 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PABPC5Q96DU9 382 aaKnown RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 CLN6Q9NWW5 311 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 DMTF1Q9Y222 760 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 IFRD1O00458 451 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 SRGAP2O75044 1071 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 SDC2P34741 201 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 GCLMP48507 274 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ARPC4P59998 168 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ATP2C1P98194 919 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PLD1Q13393 1074 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 NR1D2Q14995 579 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 HKDC1Q2TB90 917 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 TXNDC11Q6PKC3 985 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 LRRC69Q6ZNQ3 347 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 NLGN1Q8N2Q7 840 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 CAPSLQ8WWF8 208 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 CDH9Q9ULB4 789 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ABCC2Q92887 1545 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PRRG1O14668 218 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ZBTB5O15062 677 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ULK1O75385 1050 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 TAF5LO75529 589 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 EPN2O95208 641 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ZNF806P0C7X5 589 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 STIP1P31948 543 aaKnown RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 UGT1A5P35504 534 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PRKAA1Q13131 559 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PGS1Q32NB8 556 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 FBXW10Q5XX13 1052 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 FOXP4Q8IVH2 680 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 GDPD5Q8WTR4 605 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 SYN2Q92777 582 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 NSMCE2Q96MF7 247 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 C1QTNF7Q9BXJ2 289 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ALG13Q9NP73 1137 aaKnown RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 DPP7Q9UHL4 492 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 GIT1Q9Y2X7 761 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 AKAP8O43823 692 aaKnown RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 IFNA6P05013 189 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PTPN4P29074 926 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 SKIV2L2P42285 1042 aaKnown RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PEX6Q13608 980 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 NFYCQ13952 458 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PYDC2Q56P42 97 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 LRRC71Q8N4P6 559 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ZNF669Q96BR6 464 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 SGF29Q96ES7 293 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 TUBB1Q9H4B7 451 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 C12orf4Q9NQ89 552 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PDGFCQ9NRA1 345 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 LAMC3Q9Y6N6 1575 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PPEF1O14829 653 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PTGS2P35354 604 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 RABL6Q3YEC7 729 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ARID3BQ8IVW6 561 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ZNF655Q8N720 491 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 SIK2Q9H0K1 926 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ISCUQ9H1K1 167 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 RXFP1Q9HBX9 757 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 AGO2Q9UKV8 859 aaKnown RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ZNF214Q9UL59 606 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 ITIH6Q6UXX5 1313 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PTCH1Q13635 1447 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 GPR15P49685 360 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 IZUMO2Q6UXV1 221 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PM20D2Q8IYS1 436 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 REXO5Q96IC2 774 aaKnown RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 TCF7L2Q9NQB0 619 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 INTS10Q9NVR2 710 aaKnown RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 COL17A1Q9UMD9 1497 aaPredicted RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 FAM170AA1A519 330 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 CHURC1-FNTBB4DL54 471 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 BBOX1O75936 387 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 PRR29P0C7W0 189 aa6.89□□□□□ -1.31
POLR1A-201ENST00000263857 POLR2EP19388 210 aaKnown RBP6.89□□□□□ -1.31
POLR1A-201ENST00000263857 HOXC9P31274 260 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms