RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RIN3Q8TB24 985 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 KAT5Q92993 513 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.01□□□□□ -0.17
SGCA-201ENST00000262018 L2HGDHQ9H9P8 463 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 KIF9Q9HAQ2 790 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 ADAMTS1Q9UHI8 967 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 GUCA1BQ9UMX6 200 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 C2CD2Q9Y426 696 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 ADAMTS9Q9P2N4 1935 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 PLXNB3Q9ULL4 1909 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 ANTXRLA6NF34 631 aa14□□□□□ -0.17
SGCA-201ENST00000262018 SERPINF2P08697 491 aa14□□□□□ -0.17
SGCA-201ENST00000262018 BIRC3Q13489 604 aa14□□□□□ -0.17
SGCA-201ENST00000262018 TMEM132DQ14C87 1099 aa14□□□□□ -0.17
SGCA-201ENST00000262018 ZBTB6Q15916 424 aa14□□□□□ -0.17
SGCA-201ENST00000262018 CRY1Q16526 586 aa14□□□□□ -0.17
SGCA-201ENST00000262018 OR5B17Q8NGF7 314 aa14□□□□□ -0.17
SGCA-201ENST00000262018 SLC30A5Q8TAD4 765 aa14□□□□□ -0.17
SGCA-201ENST00000262018 CEP76Q8TAP6 659 aa14□□□□□ -0.17
SGCA-201ENST00000262018 GIPC2Q8TF65 315 aa14□□□□□ -0.17
SGCA-201ENST00000262018 TATDN2Q93075 761 aa14□□□□□ -0.17
SGCA-201ENST00000262018 FAM84AQ96KN4 292 aa14□□□□□ -0.17
SGCA-201ENST00000262018 TUBGCP4Q9UGJ1 667 aa14□□□□□ -0.17
SGCA-201ENST00000262018 ZMYM5Q9UJ78 669 aa14□□□□□ -0.17
SGCA-201ENST00000262018 NAGPAQ9UK23 515 aa14□□□□□ -0.17
SGCA-201ENST00000262018 MMP17Q9ULZ9 603 aa14□□□□□ -0.17
SGCA-201ENST00000262018 UBQLN1Q9UMX0 589 aaKnown RBP14□□□□□ -0.17
SGCA-201ENST00000262018 TFR2Q9UP52 801 aa14□□□□□ -0.17
SGCA-201ENST00000262018 APOBEC2Q9Y235 224 aaKnown RBP14□□□□□ -0.17
SGCA-201ENST00000262018 TK2O00142 265 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 TULP1O00294 542 aaPredicted RBP13.99□□□□□ -0.17
SGCA-201ENST00000262018 DDX3XO00571 662 aaKnown RBP eCLIP13.99□□□□□ -0.17
SGCA-201ENST00000262018 HNRNPLP14866 589 aaKnown RBP eCLIP13.99□□□□□ -0.17
SGCA-201ENST00000262018 CYP3A5P20815 502 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 HOXD12P35452 270 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 TUBB4BP68371 445 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 TUBB2AQ13885 445 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 DUOXA2Q1HG44 320 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 MGAT5BQ3V5L5 792 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 PEAR1Q5VY43 1037 aaPredicted RBP13.99□□□□□ -0.17
SGCA-201ENST00000262018 SMYD5Q6GMV2 418 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 OVOS1Q6IE37 1185 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 JADE1Q6IE81 842 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 TMEM92Q6UXU6 159 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 DSTYKQ6XUX3 929 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 DEFB119Q8N690 84 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 WHAMMQ8TF30 809 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 PI4K2AQ9BTU6 479 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 TUBB2BQ9BVA1 445 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 DUS2Q9NX74 493 aaKnown RBP13.99□□□□□ -0.17
SGCA-201ENST00000262018 BCCIPQ9P287 314 aaKnown RBP eCLIP13.99□□□□□ -0.17
SGCA-201ENST00000262018 RAI2Q9Y5P3 530 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 KIAA1549LQ6ZVL6 1849 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 TNRC6BQ9UPQ9 1833 aaKnown RBP13.99□□□□□ -0.17
SGCA-201ENST00000262018 MYO16Q9Y6X6 1858 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 TENM4Q6N022 2769 aa13.99□□□□□ -0.17
SGCA-201ENST00000262018 BTNL10A8MVZ5 291 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 ARHGAP33O14559 1287 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 NFICP08651 508 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 ATF6P18850 670 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 IFNAR2P48551 515 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 TUFMP49411 452 aaKnown RBP13.98□□□□□ -0.17
SGCA-201ENST00000262018 CYP4F3Q08477 520 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 NCOA4Q13772 614 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 SPDYCQ5MJ68 293 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 TXNDC8Q6A555 127 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 ALKBH5Q6P6C2 394 aaKnown RBP13.98□□□□□ -0.17
SGCA-201ENST00000262018 TRAPPC11Q7Z392 1133 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 EFCAB13Q8IY85 973 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 AGPAT1Q99943 283 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 CAPN10Q9HC96 672 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 DNAAF2Q9NVR5 837 aaKnown RBP13.98□□□□□ -0.17
SGCA-201ENST00000262018 INTUQ9ULD6 942 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 WNT6Q9Y6F9 365 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 DUSP10Q9Y6W6 482 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 ZNF462Q96JM2 2506 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 SHROOM3Q8TF72 1996 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 CTAGE9A4FU28 777 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 K7EQS6 105 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 CTIFO43310 598 aaKnown RBP13.98□□□□□ -0.17
SGCA-201ENST00000262018 PHACTR2O75167 634 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 TNFAIP3P21580 790 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 DDX6P26196 483 aaKnown RBP eCLIP13.98□□□□□ -0.17
SGCA-201ENST00000262018 NR1H3Q13133 447 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 BYSLQ13895 437 aaKnown RBP13.98□□□□□ -0.17
SGCA-201ENST00000262018 MAP7D1Q3KQU3 841 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 TMEM150AQ86TG1 271 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 SLCO6A1Q86UG4 719 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 NAXDQ8IW45 347 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 PGBD3Q8N328 593 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 RNF10Q8N5U6 811 aaKnown RBP13.98□□□□□ -0.17
SGCA-201ENST00000262018 OSCP1Q8WVF1 389 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 ATP2A3Q93084 1043 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 ANKRD36BP1Q96IX9 119 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 NAPGQ99747 312 aaPredicted RBP13.98□□□□□ -0.17
SGCA-201ENST00000262018 MTMR12Q9C0I1 747 aa13.98□□□□□ -0.17
SGCA-201ENST00000262018 APOBEC3GQ9HC16 384 aaKnown RBP13.98□□□□□ -0.17
SGCA-201ENST00000262018 POLMQ9NP87 494 aaPredicted RBP13.98□□□□□ -0.17
SGCA-201ENST00000262018 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.98□□□□□ -0.17
SGCA-201ENST00000262018 HSFX1Q9UBD0 423 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms