RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 GOLGA8RI6L899 631 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 MMP3P08254 477 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 TMEM62Q0P6H9 643 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 ZBTB6Q15916 424 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 PLEKHG4Q58EX7 1191 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 SLC9A4Q6AI14 798 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 C18orf25Q96B23 403 aaPredicted RBP23.38■■□□□ 1.33
MCF2L-201ENST00000261963 CCDC28BQ9BUN5 200 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 PLEKHA5Q9HAU0 1116 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 RAB6BQ9NRW1 208 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 GJD2Q9UKL4 321 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 APOL1O14791 398 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 KCNN4O15554 427 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 TFE3P19532 575 aaPredicted RBP23.37■■□□□ 1.33
MCF2L-201ENST00000261963 TGM2P21980 687 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 RBL1P28749 1068 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 SDC4P31431 198 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 EPHX2P34913 555 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 HDAC4P56524 1084 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 C9orf131Q5VYM1 1079 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 ZNF467Q7Z7K2 595 aaPredicted RBP23.37■■□□□ 1.33
MCF2L-201ENST00000261963 TCP10LQ8TDR4 215 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 WDR60Q8WVS4 1066 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 DDX50Q9BQ39 737 aaKnown RBP23.37■■□□□ 1.33
MCF2L-201ENST00000261963 SETD4Q9NVD3 440 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 PAK5Q9P286 719 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 DCTN4Q9UJW0 460 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 GINS2Q9Y248 185 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 DERAQ9Y315 318 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 HES2Q9Y543 173 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 HEY1Q9Y5J3 304 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 PDHXO00330 501 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 HCRTO43612 131 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 MAP3K6O95382 1288 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 SETSIPP0DME0 302 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 BCAR1P56945 870 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 CBLBQ13191 982 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 KBTBD2Q8IY47 623 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 TBCBQ99426 244 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 MMADHCQ9H3L0 296 aaPredicted RBP23.37■■□□□ 1.33
MCF2L-201ENST00000261963 CDHR5Q9HBB8 845 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 SLC17A7Q9P2U7 560 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 ATXN10Q9UBB4 475 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 PHF24Q9UPV7 400 aa23.37■■□□□ 1.33
MCF2L-201ENST00000261963 C1QAP02745 245 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 ZCCHC18P0CG32 403 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 KBTBD12Q3ZCT8 623 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 TRIM74Q86UV6 250 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 TRIM73Q86UV7 250 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 LRRN4Q8WUT4 740 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 SLC44A1Q8WWI5 657 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 SLC10A4Q96EP9 437 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 DPEP3Q9H4B8 488 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 RNF19AQ9NV58 838 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 PLXNB2O15031 1838 aa23.36■■□□□ 1.33
MCF2L-201ENST00000261963 DUSP28Q4G0W2 176 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 GLRA4Q5JXX5 417 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 UPF1Q92900 1129 aaKnown RBP eCLIP23.35■■□□□ 1.333e-8■■■□□ 17
MCF2L-201ENST00000261963 HEY2Q9UBP5 337 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 ANGPTL2Q9UKU9 493 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 A8MXQ7 604 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 MDM4O15151 490 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 ADCY6O43306 1168 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 YWHAGP61981 247 aaKnown RBP eCLIP23.35■■□□□ 1.33
MCF2L-201ENST00000261963 YWHAZP63104 245 aaKnown RBP23.35■■□□□ 1.33
MCF2L-201ENST00000261963 SOWAHAQ2M3V2 549 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 PABPC1LQ4VXU2 614 aaKnown RBP23.35■■□□□ 1.33
MCF2L-201ENST00000261963 FAXCQ5TGI0 409 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 PDCD7Q8N8D1 485 aaKnown RBP23.35■■□□□ 1.33
MCF2L-201ENST00000261963 RFWD2Q8NHY2 731 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 ALKBH8Q96BT7 664 aaKnown RBP23.35■■□□□ 1.33
MCF2L-201ENST00000261963 SERAC1Q96JX3 654 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 CENPKQ9BS16 269 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 FAM49AQ9H0Q0 323 aaPredicted RBP23.35■■□□□ 1.33
MCF2L-201ENST00000261963 KANSL3Q9P2N6 904 aa23.35■■□□□ 1.33
MCF2L-201ENST00000261963 BCLAF3A2AJT9 711 aaKnown RBP23.34■■□□□ 1.33
MCF2L-201ENST00000261963 TM9SF1O15321 606 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 ZNF200P98182 395 aaPredicted RBP23.34■■□□□ 1.33
MCF2L-201ENST00000261963 FAAP100Q0VG06 881 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 PTK7Q13308 1070 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 THOC5Q13769 683 aaKnown RBP23.34■■□□□ 1.33
MCF2L-201ENST00000261963 SLC27A1Q6PCB7 646 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 RINLQ6ZS11 566 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 SH2D5Q6ZV89 423 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 PRPF39Q86UA1 669 aaKnown RBP23.34■■□□□ 1.33
MCF2L-201ENST00000261963 CLEC4CQ8WTT0 213 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 ZNF670Q9BS34 389 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 PLAC1Q9HBJ0 212 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 BTBD19C9JJ37 291 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 GPR32O75388 356 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 ARHGAP17Q68EM7 881 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 LRRC52Q8N7C0 313 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 OR6J1Q8NGC5 347 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 PPP1R13LQ8WUF5 828 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 C11orf84Q9BUA3 381 aaPredicted RBP23.34■■□□□ 1.33
MCF2L-201ENST00000261963 OCEL1Q9H607 264 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 HESX1Q9UBX0 185 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 WASF2Q9Y6W5 498 aa23.34■■□□□ 1.33
MCF2L-201ENST00000261963 WDR91A4D1P6 747 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 STRNO43815 780 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms