RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 COL2A1P02458 1487 aaPredicted RBP16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 ATP9BO43861 1147 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 ETS2P15036 469 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 GHRHRQ02643 423 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 NME3Q13232 169 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 TNS4Q8IZW8 715 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 SCYL1Q96KG9 808 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 PANX3Q96QZ0 392 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 THAP1Q9NVV9 213 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 DPP3Q9NY33 737 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 GGA3Q9NZ52 723 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 DCXO43602 365 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 CILPO75339 1184 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 IL18RAPO95256 599 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 NPTXRO95502 500 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 ERVK-10P10266 1014 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 MRPS5P82675 430 aaKnown RBP16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 PMF1Q6P1K2 205 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 PID1Q7Z2X4 250 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 CAND1Q86VP6 1230 aaKnown RBP16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 ZNF276Q8N554 614 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 APOL2Q9BQE5 337 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 DOCK5Q9H7D0 1870 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 EFHC1Q5JVL4 640 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 PPP1R26Q5T8A7 1209 aaPredicted RBP16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 KBTBD2Q8IY47 623 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 EBNA1BP2Q99848 306 aaKnown RBP16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 BARX2Q9UMQ3 279 aaPredicted RBP16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 AP4E1Q9UPM8 1137 aa16.7■□□□□ 0.26
SNCAIP-202ENST00000261368 C2CD4BA6NLJ0 364 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 RFPL1O75677 317 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 TFE3P19532 575 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 OAZ1P54368 228 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 RBP5P82980 135 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 IFRD2Q12894 506 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 PDK2Q15119 407 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 EML3Q32P44 896 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 CCDC14Q49A88 953 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 TREML2Q5T2D2 321 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 CMC1Q7Z7K0 106 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 RNF148Q8N7C7 305 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 PIWIL2Q8TC59 973 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 C20orf27Q9GZN8 174 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 NRDE2Q9H7Z3 1164 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 TLE6Q9H808 572 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 ZNF358Q9NW07 568 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 LOXHD1Q8IVV2 1947 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 TM7SF2O76062 418 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 MSX2P35548 267 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 OCRLQ01968 901 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 MED21Q13503 144 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 KCTD2Q14681 263 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 MMEL1Q495T6 779 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 DALRD3Q5D0E6 543 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 UBR7Q8N806 425 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 TSNARE1Q96NA8 513 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 USP29Q9HBJ7 922 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 KLHL8Q9P2G9 620 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 RPS6KL1Q9Y6S9 549 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 B4GALT4O60513 344 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 ZBTB7AO95365 584 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 ARIH2O95376 493 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 CDH5P33151 784 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 SERPINB5P36952 375 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 SERPINB9P50453 376 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 USP4Q13107 963 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 ST13P4Q8IZP2 240 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 CHST13Q8NET6 341 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 DNERQ8NFT8 737 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 SHKBP1Q8TBC3 707 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 CLEC4CQ8WTT0 213 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 MCRS1Q96EZ8 462 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 OTUD5Q96G74 571 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 MFHAS1Q9Y4C4 1052 aa16.69■□□□□ 0.26
SNCAIP-202ENST00000261368 GOLGA8TH3BQL2 631 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 KCNK1O00180 336 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 DNAJC6O75061 913 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 C10orf107Q8IVU9 208 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 PYROXD2Q8N2H3 581 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 COLGALT1Q8NBJ5 622 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 MTMR14Q8NCE2 650 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 SREK1Q8WXA9 508 aaKnown RBP16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 NDRG1Q92597 394 aaKnown RBP16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 C7orf26Q96N11 449 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 UNKQ9C0B0 810 aaKnown RBP16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 KRT82Q9NSB4 513 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 SORBS2O94875 1100 aaKnown RBP16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 DHRS4L1P0CG22 281 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 ADORA2AP29274 412 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 REPS2Q8NFH8 660 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 PIP4K2CQ8TBX8 421 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 ECSITQ9BQ95 431 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 TRDMT1O14717 391 aaKnown RBP16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 ITGBL1O95965 494 aaPredicted RBP16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 PDPK2PQ6A1A2 396 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 TRNP1Q6NT89 227 aa16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 NET1Q7Z628 596 aaPredicted RBP16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 ZNF669Q96BR6 464 aaPredicted RBP16.68■□□□□ 0.26
SNCAIP-202ENST00000261368 XPNPEP3Q9NQH7 507 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms