RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CSDE1O75534 798 aaKnown RBP16.42■□□□□ 0.22
LMNB1-201ENST00000261366 CLPTM1O96005 669 aa16.42■□□□□ 0.22
LMNB1-201ENST00000261366 PDGFRAP16234 1089 aa16.42■□□□□ 0.22
LMNB1-201ENST00000261366 NELFEP18615 380 aaKnown RBP16.42■□□□□ 0.22
LMNB1-201ENST00000261366 IDH3AP50213 366 aa16.42■□□□□ 0.22
LMNB1-201ENST00000261366 SESN2P58004 480 aaPredicted RBP16.42■□□□□ 0.22
LMNB1-201ENST00000261366 YWHAEP62258 255 aaKnown RBP16.42■□□□□ 0.22
LMNB1-201ENST00000261366 ITGA9Q13797 1035 aa16.42■□□□□ 0.22
LMNB1-201ENST00000261366 OR6B2Q6IFH4 312 aa16.42■□□□□ 0.22
LMNB1-201ENST00000261366 CMASQ8NFW8 434 aaPredicted RBP16.42■□□□□ 0.22
LMNB1-201ENST00000261366 SNRNP27Q8WVK2 155 aaKnown RBP16.42■□□□□ 0.22
LMNB1-201ENST00000261366 PRPF18Q99633 342 aaKnown RBP16.42■□□□□ 0.22
LMNB1-201ENST00000261366 DOCK5Q9H7D0 1870 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 WDR27A2RRH5 827 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 SPDYE16A6NNV3 312 aaPredicted RBP16.41■□□□□ 0.22
LMNB1-201ENST00000261366 CHADO15335 359 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 ADCY6O43306 1168 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 PRPSAP2O60256 369 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 SPAG6O75602 509 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 LDHAP00338 332 aaKnown RBP16.41■□□□□ 0.22
LMNB1-201ENST00000261366 ASLP04424 464 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 ITGA2BP08514 1039 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 TCN1P20061 433 aaPredicted RBP16.41■□□□□ 0.22
LMNB1-201ENST00000261366 CCND2P30279 289 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 ALDH1A3P47895 512 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 HNRNPDQ14103 355 aaKnown RBP16.41■□□□□ 0.22
LMNB1-201ENST00000261366 CNGA3Q16281 694 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 CA9Q16790 459 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 NADK2Q4G0N4 442 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 PABPC1LQ4VXU2 614 aaKnown RBP16.41■□□□□ 0.22
LMNB1-201ENST00000261366 VSIG10LQ86VR7 867 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 CLMNQ96JQ2 1002 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 PAK5Q9P286 719 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 PSAT1Q9Y617 370 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 IL1BP01584 269 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 FGF3P11487 239 aaPredicted RBP16.41■□□□□ 0.22
LMNB1-201ENST00000261366 ASPAP45381 313 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 GTF2A2P52657 109 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 SP2Q02086 613 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 MBLAC2Q68D91 279 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 TRNP1Q6NT89 227 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 PPP1R2P3Q6NXS1 205 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 AAGABQ6PD74 315 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 UGT2A3Q6UWM9 527 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 PLD5Q8N7P1 536 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 UBR7Q8N806 425 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 PPP4R1Q8TF05 950 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 RXFP2Q8WXD0 754 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 USP13Q92995 863 aaPredicted RBP16.41■□□□□ 0.22
LMNB1-201ENST00000261366 DTNBP1Q96EV8 351 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 BTBD7Q9P203 1132 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
LMNB1-201ENST00000261366 EMCNQ9ULC0 261 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 LZTS1Q9Y250 596 aa16.41■□□□□ 0.22
LMNB1-201ENST00000261366 A0A1B0GTW7 788 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 ASNSP08243 561 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 CRHR1P34998 444 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 PKNOX1P55347 436 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 CXCL9Q07325 125 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 TMED1Q13445 227 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 MYBPC3Q14896 1274 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 ACAP1Q15027 740 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 DUOXA2Q1HG44 320 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 NIM1KQ8IY84 436 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 METTL25Q8N6Q8 603 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 DCUN1D1Q96GG9 259 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 C1orf21Q9H246 121 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 DNAJB4Q9UDY4 337 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 PHF24Q9UPV7 400 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 HEMK1Q9Y5R4 338 aaPredicted RBP16.4■□□□□ 0.22
LMNB1-201ENST00000261366 COL4A5P29400 1685 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 WNT10BO00744 389 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 PRKCHP24723 683 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 FDFT1P37268 417 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 CAPSQ13938 189 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 XKR3Q5GH77 459 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 PPM1LQ5SGD2 360 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 C6orf52Q5T4I8 152 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 WDR78Q5VTH9 848 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 KLHDC10Q6PID8 442 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 CMC1Q7Z7K0 106 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 SDCCAG8Q86SQ7 713 aaPredicted RBP16.4■□□□□ 0.22
LMNB1-201ENST00000261366 LENG1Q96BZ8 264 aaPredicted RBP16.4■□□□□ 0.22
LMNB1-201ENST00000261366 ZNF518BQ9C0D4 1074 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 COPS7BQ9H9Q2 264 aaPredicted RBP16.4■□□□□ 0.22
LMNB1-201ENST00000261366 EFR3BQ9Y2G0 817 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 SF3B1O75533 1304 aaKnown RBP eCLIP16.4■□□□□ 0.223e-6■■■■■ 73.4
LMNB1-201ENST00000261366 VILLO15195 856 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 ZBTB14O43829 449 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 PEX1O43933 1283 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 CCNT2O60583 730 aaKnown RBP16.4■□□□□ 0.22
LMNB1-201ENST00000261366 KLHL2O95198 593 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 ALDOAP04075 364 aaKnown RBP16.4■□□□□ 0.22
LMNB1-201ENST00000261366 GJB1P08034 283 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 SMIM18P0DKX4 95 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 NUDT2P50583 147 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 PDE1CQ14123 709 aaPredicted RBP16.4■□□□□ 0.22
LMNB1-201ENST00000261366 LRRC71Q8N4P6 559 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 GSDMBQ8TAX9 411 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 PPP1R16BQ96T49 567 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms