RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MIPP30301 263 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 PCK1P35558 622 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 AVPR1AP37288 418 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 SLC1A1P43005 524 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 CXCR3P49682 368 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 TBX4P57082 545 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 TAS2R40P59535 323 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 ZC3H12AQ5D1E8 599 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 TRIM58Q8NG06 486 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 ADAMTS19Q8TE59 1207 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 FCRL2Q96LA5 508 aaPredicted RBP16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 NECTIN4Q96NY8 510 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 ALS2CR12Q96Q35 445 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 PEBP4Q96S96 227 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 ANLNQ9NQW6 1124 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 ZMYM5Q9UJ78 669 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 I6L893 689 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 MBTPS2O43462 519 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 SPOPO43791 374 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 PRAMEF12O95522 483 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 FTCDO95954 541 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 IL1R2P27930 398 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 KCNQ1P51787 676 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 SLC25A11Q02978 314 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 SMAD4Q13485 552 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 ZNF569Q5MCW4 686 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 TXNRD3NBQ6F5E7 133 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 SCYL2Q6P3W7 929 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 CYP4V2Q6ZWL3 525 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 DENND4AQ7Z401 1863 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 NT5DC3Q86UY8 548 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 SYCE1Q8N0S2 351 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 MAFAQ8NHW3 353 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 ZSCAN18Q8TBC5 510 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 USP13Q92995 863 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 WBP2Q969T9 261 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 MYADMQ96S97 322 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 PCSK1NQ9UHG2 260 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 CDH7Q9ULB5 785 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 ARHGAP26Q9UNA1 814 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 CCL26Q9Y258 94 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 HBS1LQ9Y450 684 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 KIF5CO60282 957 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 STC2O76061 302 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 IRF1P10914 325 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 SSR1P43307 286 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 COG7P83436 770 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 RING1Q06587 406 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 ARID3BQ8IVW6 561 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 SLC35F6Q8N357 371 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 CCDC185Q8N715 623 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 CD101Q93033 1021 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 WDCPQ9H6R7 721 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 TMPRSS4Q9NRS4 437 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 GDE1Q9NZC3 331 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 USP18Q9UMW8 372 aa16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 PACSIN2Q9UNF0 486 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-201ENST00000260054 DOCK8Q8NF50 2099 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 COL6A3P12111 3177 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 UNC80Q8N2C7 3258 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 CCR1P32246 355 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 KPNA1P52294 538 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 PPP2R5DQ14738 602 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 FAM78AQ5JUQ0 283 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 SND1Q7KZF4 910 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 PEX26Q7Z412 305 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 RIN3Q8TB24 985 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 RNF34Q969K3 372 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 ASB16Q96NS5 453 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 NCAPGQ9BPX3 1015 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 TKTL2Q9H0I9 626 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 PRDM6Q9NQX0 595 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 TDP1Q9NUW8 608 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 ARHGEF38Q9NXL2 777 aa16.42■□□□□ 0.22
CCDC90B-201ENST00000260054 KCNU1A8MYU2 1149 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 PRPSAP2O60256 369 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 GREM1O60565 184 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 KLKB1P03952 638 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 TNNT1P13805 278 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 MSNP26038 577 aaKnown RBP16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 WEE1P30291 646 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 SMTNL2Q2TAL5 461 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 LEXMQ3ZCV2 418 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 KCNT1Q5JUK3 1230 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 BRMS1LQ5PSV4 323 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 NYAP1Q6ZVC0 841 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 TTC16Q8NEE8 873 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 SH3RF2Q8TEC5 729 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 PLD4Q96BZ4 506 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 ZWILCHQ9H900 591 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 XPO7Q9UIA9 1087 aaKnown RBP16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 AMFRQ9UKV5 643 aa16.41■□□□□ 0.22
CCDC90B-201ENST00000260054 LEFTY2O00292 366 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 MOCS2O96007 188 aaPredicted RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 SLC2A3P11169 496 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 GBP2P32456 591 aaPredicted RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 ADRA1BP35368 520 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 GJC1P36383 396 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 MARCKSL1P49006 195 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms