RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 CCDC137Q6PK04 289 aaKnown RBP18.18■□□□□ 0.5
SRSF1-201ENST00000258962 C4orf50Q6ZRC1 276 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 ATG4AQ8WYN0 398 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 HSPH1Q92598 858 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 TRIM51Q9BSJ1 452 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 PHF7Q9BWX1 381 aaPredicted RBP18.18■□□□□ 0.5
SRSF1-201ENST00000258962 DCLK3Q9C098 648 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 PNPLA8Q9NP80 782 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 CALCOCO1Q9P1Z2 691 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
SRSF1-201ENST00000258962 NCOR1O75376 2440 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 TTC28Q96AY4 2481 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 YJEFN3A6XGL0 299 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 E7ENQ6 273 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 PRRG1O14668 218 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 PRPSAP2O60256 369 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 ABLIM3O94929 683 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 FYNP06241 537 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 C8AP07357 584 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 USP17L7P0C7H9 530 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 CYP2F1P24903 491 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 CETN2P41208 172 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 FNTAP49354 379 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 CARSP49589 748 aaKnown RBP18.17■□□□□ 0.5
SRSF1-201ENST00000258962 ATXN1P54253 815 aaKnown RBP18.17■□□□□ 0.5
SRSF1-201ENST00000258962 YWHAZP63104 245 aaKnown RBP18.17■□□□□ 0.5
SRSF1-201ENST00000258962 PITX1P78337 314 aaPredicted RBP18.17■□□□□ 0.5
SRSF1-201ENST00000258962 KAZNQ674X7 775 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 RTL10Q7L3V2 364 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 BNIPLQ7Z465 357 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 JAMLQ86YT9 394 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 IFT20Q8IY31 132 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 DCP1BQ8IZD4 617 aaKnown RBP18.17■□□□□ 0.5
SRSF1-201ENST00000258962 SMG7Q92540 1137 aaKnown RBP18.17■□□□□ 0.5
SRSF1-201ENST00000258962 NT5C3BQ969T7 300 aa18.17■□□□□ 0.5
SRSF1-201ENST00000258962 WDR27A2RRH5 827 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 FAM187AA6NFU0 413 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 ENDOD1O94919 500 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 HNRNPA1P09651 372 aaKnown RBP eCLIP18.16■□□□□ 0.5
SRSF1-201ENST00000258962 ATF2P15336 505 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 NOS2P35228 1153 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 KCNJ1P48048 391 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 SLC25A52Q3SY17 297 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 ODF2Q5BJF6 829 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 SYPL2Q5VXT5 272 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 SCYL2Q6P3W7 929 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 STRADAQ7RTN6 431 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 GJD3Q8N144 294 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 SCML4Q8N228 414 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 SLC7A14Q8TBB6 771 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 AENQ8WTP8 325 aaKnown RBP18.16■□□□□ 0.5
SRSF1-201ENST00000258962 TEKT4Q8WW24 435 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 SEC14L1Q92503 715 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 NPY6RQ99463 290 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 NCAPGQ9BPX3 1015 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 SNRNP25Q9BV90 132 aaKnown RBP18.16■□□□□ 0.5
SRSF1-201ENST00000258962 PRKD2Q9BZL6 878 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 GPATCH2LQ9NWQ4 482 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 MAFFQ9ULX9 164 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 XIRP2A4UGR9 3374 aa18.16■□□□□ 0.5
SRSF1-201ENST00000258962 GREB1Q4ZG55 1949 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 ZNF638Q14966 1978 aaKnown RBP18.15■□□□□ 0.5
SRSF1-201ENST00000258962 XYLBO75191 536 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 TJP3O95049 919 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 ZBED1O96006 694 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 DESP17661 470 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 SULT1E1P49888 294 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 ZP2Q05996 745 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 SNX1Q13596 522 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 DCAF6Q58WW2 860 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 PM20D1Q6GTS8 502 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 KCTD6Q8NC69 237 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 RUNDC3BQ96NL0 473 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 CYP4F11Q9HBI6 524 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 POPDC2Q9HBU9 364 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.15■□□□□ 0.5
SRSF1-201ENST00000258962 ABI2Q9NYB9 513 aaPredicted RBP18.15■□□□□ 0.5
SRSF1-201ENST00000258962 AFF4Q9UHB7 1163 aaKnown RBP18.15■□□□□ 0.5
SRSF1-201ENST00000258962 CDH22Q9UJ99 828 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 EFR3BQ9Y2G0 817 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 USP3Q9Y6I4 520 aa18.15■□□□□ 0.5
SRSF1-201ENST00000258962 TNFRSF10BO14763 440 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 HOXA9P31269 272 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 GPR17Q13304 367 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 CCNG2Q16589 344 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 NFE2Q16621 373 aaPredicted RBP18.14■□□□□ 0.49
SRSF1-201ENST00000258962 CA9Q16790 459 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 BOLA3Q53S33 107 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 ZC3H12AQ5D1E8 599 aaKnown RBP18.14■□□□□ 0.49
SRSF1-201ENST00000258962 DDX42Q86XP3 938 aaKnown RBP eCLIP18.14■□□□□ 0.496e-8■■□□□ 14.2
SRSF1-201ENST00000258962 TCEAL8Q8IYN2 117 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 IRGQQ8WZA9 623 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 SLCO2A1Q92959 643 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 FUBP3Q96I24 572 aaKnown RBP eCLIP18.14■□□□□ 0.49
SRSF1-201ENST00000258962 FAM118BQ9BPY3 351 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 POMKQ9H5K3 350 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 NAALADL1Q9UQQ1 740 aa18.14■□□□□ 0.49
SRSF1-201ENST00000258962 MTCL1Q9Y4B5 1905 aaKnown RBP18.14■□□□□ 0.49
SRSF1-201ENST00000258962 SPTBN5Q9NRC6 3674 aaKnown RBP18.14■□□□□ 0.49
SRSF1-201ENST00000258962 MDM4O15151 490 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 209.4 ms