RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 C16orf89Q6UX73 402 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 PACS1Q6VY07 963 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 UNC5AQ6ZN44 842 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 RSPH3Q86UC2 560 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 SP8Q8IXZ3 490 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 UBR7Q8N806 425 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 DLG3Q92796 817 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 HSPBAP1Q96EW2 488 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 MMP19Q99542 508 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 KLC2Q9H0B6 622 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 PLAC1Q9HBJ0 212 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 ARHGAP28Q9P2N2 729 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 AGO2Q9UKV8 859 aaKnown RBP11.86□□□□□ -0.51
TROAP-201ENST00000257909 CNOT11Q9UKZ1 510 aaKnown RBP11.86□□□□□ -0.51
TROAP-201ENST00000257909 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 SQORQ9Y6N5 450 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 PTPRJQ12913 1337 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 SLC15A5A6NIM6 579 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 MAGEB3O15480 346 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 DKC1O60832 514 aaKnown RBP eCLIP11.86□□□□□ -0.51
TROAP-201ENST00000257909 CAPNS1P04632 268 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 CCDC130P13994 396 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 MAGEA6P43360 314 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 ACADVLP49748 655 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 WNT7BP56706 349 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 PLOD1Q02809 727 aaPredicted RBP11.86□□□□□ -0.51
TROAP-201ENST00000257909 FAM47CQ5HY64 1035 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 SYCP2LQ5T4T6 812 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 METTL21CQ5VZV1 264 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 Q6ZNX1 250 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 CAND1Q86VP6 1230 aaKnown RBP11.86□□□□□ -0.51
TROAP-201ENST00000257909 WDTC1Q8N5D0 677 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 SORT1Q99523 831 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 CGRRF1Q99675 332 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 CALN1Q9BXU9 219 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 RBAKQ9NYW8 714 aaPredicted RBP11.86□□□□□ -0.51
TROAP-201ENST00000257909 DCDC2Q9UHG0 476 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 TMX2Q9Y320 296 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 ARID2Q68CP9 1835 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 H7C0C1 242 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 ZNF195O14628 629 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 DCXO43602 365 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 PLA2G6O60733 806 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 LDHAP00338 332 aaKnown RBP11.85□□□□□ -0.51
TROAP-201ENST00000257909 PSMC3P17980 439 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 YY1P25490 414 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 ATP5OP48047 213 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 ACOT2P49753 483 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 NUP107P57740 925 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 KRT76Q01546 638 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 KLF10Q13118 480 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 FLOT2Q14254 428 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 C6orf52Q5T4I8 152 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 N4BP2L1Q5TBK1 243 aaPredicted RBP11.85□□□□□ -0.51
TROAP-201ENST00000257909 POTEHQ6S545 545 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 ISLR2Q6UXK2 745 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 TAS1R3Q7RTX0 852 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 PATL1Q86TB9 770 aaKnown RBP11.85□□□□□ -0.51
TROAP-201ENST00000257909 FAM160B2Q86V87 743 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 PHTF2Q8N3S3 785 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 TRIML2Q8N7C3 387 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 MCUQ8NE86 351 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 MCPH1Q8NEM0 835 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 TSPAN14Q8NG11 270 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 DEPDC1BQ8WUY9 529 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 JDP2Q8WYK2 163 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 SLC2A11Q9BYW1 496 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 PNPOQ9NVS9 261 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 VPS28Q9UK41 221 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 STYXL1Q9Y6J8 313 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.85□□□□□ -0.51
TROAP-201ENST00000257909 PLIN3O60664 434 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 CBFA2T3O75081 653 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 SUPT3HO75486 399 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 THRAP10827 490 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 COL11A2P13942 1736 aaPredicted RBP11.85□□□□□ -0.51
TROAP-201ENST00000257909 PORP16435 677 aaPredicted RBP11.85□□□□□ -0.51
TROAP-201ENST00000257909 ZFXP17010 805 aaPredicted RBP11.85□□□□□ -0.51
TROAP-201ENST00000257909 HARS2P49590 506 aaKnown RBP11.85□□□□□ -0.51
TROAP-201ENST00000257909 TFDP2Q14188 446 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 GK3PQ14409 553 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 PCLAFQ15004 111 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 ACAP1Q15027 740 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 AMIGO2Q86SJ2 522 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 IL31RAQ8NI17 732 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 NLRP7Q8WX94 980 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 RTP4Q96DX8 246 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 CEP170P1Q96L14 293 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 CCT7Q99832 543 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 NUF2Q9BZD4 464 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 ARHGEF38Q9NXL2 777 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 RRN3Q9NYV6 651 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 EMCNQ9ULC0 261 aa11.85□□□□□ -0.51
TROAP-201ENST00000257909 H0YJX3 145 aa11.84□□□□□ -0.51
TROAP-201ENST00000257909 TRPA1O75762 1119 aa11.84□□□□□ -0.51
TROAP-201ENST00000257909 VARSP26640 1264 aaKnown RBP11.84□□□□□ -0.51
TROAP-201ENST00000257909 ABCE1P61221 599 aaKnown RBP11.84□□□□□ -0.51
TROAP-201ENST00000257909 MRPS22P82650 360 aaKnown RBP11.84□□□□□ -0.51
TROAP-201ENST00000257909 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms