RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 CIPCQ9C0C6 399 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 THG1LQ9NWX6 298 aaKnown RBP19.47■□□□□ 0.71
PTPRE-201ENST00000254667 MEIS2O14770 477 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 PQBP1O60828 265 aaKnown RBP19.47■□□□□ 0.71
PTPRE-201ENST00000254667 GP5P40197 560 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 PLPPR4Q7Z2D5 763 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 KIF2BQ8N4N8 673 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 MAN1A2O60476 641 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 CYP2C18P33260 490 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 LRRC36Q1X8D7 754 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 PREPLQ4J6C6 727 aaPredicted RBP19.47■□□□□ 0.71
PTPRE-201ENST00000254667 NT5DC3Q86UY8 548 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 ATP13A1Q9HD20 1204 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 TMEM39AQ9NV64 488 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 HOXB8P17481 243 aaPredicted RBP19.47■□□□□ 0.71
PTPRE-201ENST00000254667 TM4SF1P30408 202 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 OR1E1P30953 314 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 PRKCQQ04759 706 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 KATNAL2Q8IYT4 538 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 ZBTB45Q96K62 511 aaPredicted RBP19.47■□□□□ 0.71
PTPRE-201ENST00000254667 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.46■□□□□ 0.71
PTPRE-201ENST00000254667 RECQL4O94761 1208 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 ERAP2Q6P179 960 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 TADA1Q96BN2 335 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 COPS7BQ9H9Q2 264 aaPredicted RBP19.46■□□□□ 0.71
PTPRE-201ENST00000254667 APOC4-APOC2K7ER74 178 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 APOC2P02655 101 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 GLI1P08151 1106 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 MLNP12872 115 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 ERFP50548 548 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 CCDC153Q494R4 210 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 SH3GL1Q99961 368 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 CTNNAL1Q9UBT7 734 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 BTKQ06187 659 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 DDX39BQ13838 428 aaKnown RBP19.46■□□□□ 0.71
PTPRE-201ENST00000254667 CBWD6Q4V339 395 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 CBWD3Q5JTY5 395 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 CBWD5Q5RIA9 395 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 SLC9A9Q8IVB4 645 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 DNAJC16Q9Y2G8 782 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 RBAK-RBAKDNI3L0D1 243 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 XYLBO75191 536 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 MAFO75444 373 aaPredicted RBP19.46■□□□□ 0.71
PTPRE-201ENST00000254667 LTFP02788 710 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 CPA2P48052 419 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 GLRBP48167 497 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 P3H2Q8IVL5 708 aa19.46■□□□□ 0.71
PTPRE-201ENST00000254667 CERS5Q8N5B7 392 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 LPCAT1Q8NF37 534 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 B4GALNT2Q8NHY0 566 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 HAS1Q92839 578 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 RIPK2O43353 540 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 PYGMP11217 842 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 CRABP2P29373 138 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 CSHL1Q14406 222 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 RRP1BQ14684 758 aaKnown RBP19.45■□□□□ 0.7
PTPRE-201ENST00000254667 PDPK2PQ6A1A2 396 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 CELF6Q96J87 481 aaKnown RBP19.45■□□□□ 0.7
PTPRE-201ENST00000254667 ABCC13Q9NSE7 274 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 ENDOD1O94919 500 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 GLRA2P23416 452 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 KLRC2P26717 231 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 CDH8P55286 799 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 MFSD7Q6UXD7 560 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 SCUBE3Q8IX30 993 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 KRT87PA6NCN2 255 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 MIPP30301 263 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 CYLC2Q14093 348 aaPredicted RBP19.45■□□□□ 0.7
PTPRE-201ENST00000254667 THAP11Q96EK4 314 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 SENP8Q96LD8 212 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 ZCCHC2Q9C0B9 1178 aaKnown RBP19.45■□□□□ 0.7
PTPRE-201ENST00000254667 MPP6Q9NZW5 540 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 SIK3Q9Y2K2 1263 aa19.45■□□□□ 0.7
PTPRE-201ENST00000254667 NCF1BA6NI72 391 aaPredicted RBP19.44■□□□□ 0.7
PTPRE-201ENST00000254667 NCF1CA8MVU1 366 aaPredicted RBP19.44■□□□□ 0.7
PTPRE-201ENST00000254667 DEAF1O75398 565 aaPredicted RBP19.44■□□□□ 0.7
PTPRE-201ENST00000254667 NCF1P14598 390 aaPredicted RBP19.44■□□□□ 0.7
PTPRE-201ENST00000254667 VHLP40337 213 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 TGM3Q08188 693 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 CNGA2Q16280 664 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 TRIM69Q86WT6 500 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 CASP10Q92851 521 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 TLR10Q9BXR5 811 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 WDR41Q9HAD4 459 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 ALBP02768 609 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 CALB2P22676 271 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 ELK3P41970 407 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 RTP1P59025 263 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 SPDYCQ5MJ68 293 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 EPB42P16452 691 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 ZNF7P17097 686 aaPredicted RBP19.44■□□□□ 0.7
PTPRE-201ENST00000254667 AMPD1P23109 780 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 PTAR1Q7Z6K3 402 aaPredicted RBP19.44■□□□□ 0.7
PTPRE-201ENST00000254667 LRRC39Q96DD0 335 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 CPNE1Q99829 537 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 ADAM2Q99965 735 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 NAALADL1Q9UQQ1 740 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 ANKRD6Q9Y2G4 727 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 RARAP10276 462 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms