RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 DNAL1Q4LDG9 190 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 SNX31Q8N9S9 440 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 DNAAF3Q8N9W5 541 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 GATA6Q92908 595 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 ATP2A3Q93084 1043 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 TMEM176AQ96HP8 235 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 EPAS1Q99814 870 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 CENPKQ9BS16 269 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 SNRNP25Q9BV90 132 aaKnown RBP17.41■□□□□ 0.38
SGPP1-201ENST00000247225 DHX33Q9H6R0 707 aaKnown RBP17.41■□□□□ 0.38
SGPP1-201ENST00000247225 MINDY3Q9H8M7 445 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 SNX9Q9Y5X1 595 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 NUDT2P50583 147 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 RABGGTBP53611 331 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 MRPS22P82650 360 aaKnown RBP17.41■□□□□ 0.38
SGPP1-201ENST00000247225 SLC18A2Q05940 514 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 PDPK2PQ6A1A2 396 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 TRIM42Q8IWZ5 723 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 SLC4A11Q8NBS3 891 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 SGF29Q96ES7 293 aa17.41■□□□□ 0.38
SGPP1-201ENST00000247225 UBA1P22314 1058 aaKnown RBP17.4■□□□□ 0.38
SGPP1-201ENST00000247225 ZNF132P52740 706 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 KCNJ11Q14654 390 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 ACAP1Q15027 740 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 GOLGA7BQ2TAP0 167 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 HSDL1Q3SXM5 330 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 LRRC23Q53EV4 343 aaPredicted RBP17.4■□□□□ 0.38
SGPP1-201ENST00000247225 HEATR6Q6AI08 1181 aaKnown RBP17.4■□□□□ 0.38
SGPP1-201ENST00000247225 OR6B3Q8NGW1 331 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 CEP70Q8NHQ1 597 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 PIWIL2Q8TC59 973 aaKnown RBP17.4■□□□□ 0.38
SGPP1-201ENST00000247225 HPDLQ96IR7 371 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 NDNQ99608 321 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 ACO2Q99798 780 aaKnown RBP17.4■□□□□ 0.38
SGPP1-201ENST00000247225 DHRS4Q9BTZ2 278 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 PPCSQ9HAB8 311 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 ASB3Q9Y575 518 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 TCRBV5S1A1TA0A578 114 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 A8MXQ7 604 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 SIN3BO75182 1162 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 MT-CO1P00395 513 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 TPH1P17752 444 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 CYP2F1P24903 491 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 ARL2P36404 184 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 AVPR1AP37288 418 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 NET1Q7Z628 596 aaPredicted RBP17.4■□□□□ 0.38
SGPP1-201ENST00000247225 CHSY1Q86X52 802 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 C1orf127Q8N9H9 656 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 SCYL1Q96KG9 808 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 GORASP1Q9BQQ3 440 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 R3HDMLQ9H3Y0 253 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 USP29Q9HBJ7 922 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 PDP2Q9P2J9 529 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 AKT3Q9Y243 479 aa17.4■□□□□ 0.38
SGPP1-201ENST00000247225 A0A088AWK7 358 aa17.39■□□□□ 0.38
SGPP1-201ENST00000247225 DHRS4L1P0CG22 281 aa17.39■□□□□ 0.38
SGPP1-201ENST00000247225 BACE1P56817 501 aa17.39■□□□□ 0.38
SGPP1-201ENST00000247225 PPM1LQ5SGD2 360 aa17.39■□□□□ 0.38
SGPP1-201ENST00000247225 MPP4Q96JB8 637 aa17.39■□□□□ 0.38
SGPP1-201ENST00000247225 CDHR1Q96JP9 859 aa17.39■□□□□ 0.38
SGPP1-201ENST00000247225 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.38
SGPP1-201ENST00000247225 S100A14Q9HCY8 104 aa17.39■□□□□ 0.38
SGPP1-201ENST00000247225 THAP1Q9NVV9 213 aa17.39■□□□□ 0.38
SGPP1-201ENST00000247225 TMEM216Q9P0N5 145 aa17.39■□□□□ 0.38
SGPP1-201ENST00000247225 E7ESA3 106 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 RPS6KA3P51812 740 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 LIN52Q52LA3 116 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 FRMD7Q6ZUT3 714 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 DHDDSQ86SQ9 333 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 ICA1LQ8NDH6 482 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 CMASQ8NFW8 434 aaPredicted RBP17.39■□□□□ 0.37
SGPP1-201ENST00000247225 TMA16Q96EY4 203 aaKnown RBP17.39■□□□□ 0.37
SGPP1-201ENST00000247225 CNPY3Q9BT09 278 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 GRIP2Q9C0E4 1043 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 XYLT2Q9H1B5 865 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 KIF13BQ9NQT8 1826 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 MSCO60682 206 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 DNAJC6O75061 913 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 HOXC6P09630 235 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 GK3PQ14409 553 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 PMF1Q6P1K2 205 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 FAM43BQ6ZT52 329 aaPredicted RBP17.39■□□□□ 0.37
SGPP1-201ENST00000247225 PCDHGB4Q9UN71 923 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 PCDHGB5Q9Y5G0 923 aa17.39■□□□□ 0.37
SGPP1-201ENST00000247225 ZNFX1Q9P2E3 1918 aaKnown RBP17.38■□□□□ 0.37
SGPP1-201ENST00000247225 STX16-NPEPL1H3BU86 382 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 TGDSO95455 350 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 VTNP04004 478 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 GSTA2P09210 222 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 VCLP18206 1134 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 NME3Q13232 169 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 ANGEL2Q5VTE6 544 aaKnown RBP17.38■□□□□ 0.37
SGPP1-201ENST00000247225 EFCAB12Q6NXP0 572 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 TP53INP2Q8IXH6 220 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 ZNF280CQ8ND82 737 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 GSDMBQ8TAX9 411 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 ZNF518BQ9C0D4 1074 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 COPS7BQ9H9Q2 264 aaPredicted RBP17.38■□□□□ 0.37
SGPP1-201ENST00000247225 XPNPEP3Q9NQH7 507 aa17.38■□□□□ 0.37
SGPP1-201ENST00000247225 CNTN3Q9P232 1028 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms