RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 TMPRSS15P98073 1019 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 TPSAB1Q15661 275 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 GRIK4Q16099 956 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 GLRA4Q5JXX5 417 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 MROH9Q5TGP6 573 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 KCNT2Q6UVM3 1135 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 DSTYKQ6XUX3 929 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 RINLQ6ZS11 566 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 SH3TC2Q8TF17 1288 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 E2F7Q96AV8 911 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 MAML3Q96JK9 1138 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 C11orf84Q9BUA3 381 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-202ENST00000244303 NMUR2Q9GZQ4 415 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 RNF19AQ9NV58 838 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 MTMR10Q9NXD2 777 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 ARMCX1Q9P291 453 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 AP4E1Q9UPM8 1137 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 NR2E3Q9Y5X4 410 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 HMX2A2RU54 273 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 ESRRAP11474 423 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-202ENST00000244303 PTPN9P43378 593 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 CHI3L2Q15782 390 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 KIZQ2M2Z5 673 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 DUSP28Q4G0W2 176 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 CAPRIN2Q6IMN6 1127 aaKnown RBP14.87□□□□□ -0.03
HIF3A-202ENST00000244303 C4orf22Q6V702 233 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 ZDHHC17Q8IUH5 632 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 CCDC185Q8N715 623 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 C18orf25Q96B23 403 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-202ENST00000244303 MTBPQ96DY7 904 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 NAF1Q96HR8 494 aaKnown RBP14.87□□□□□ -0.03
HIF3A-202ENST00000244303 KCTD15Q96SI1 283 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-202ENST00000244303 ZNF395Q9H8N7 513 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-202ENST00000244303 MKS1Q9NXB0 559 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 SIRPGQ9P1W8 387 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 GINS2Q9Y248 185 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 MFHAS1Q9Y4C4 1052 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 HES2Q9Y543 173 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 PCDHA11Q9Y5I1 949 aa14.87□□□□□ -0.03
HIF3A-202ENST00000244303 A8MXQ7 604 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 PPP1R12AO14974 1030 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 MMP3P08254 477 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 LCP1P13796 627 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 CCDC130P13994 396 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 ADORA2BP29275 332 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 SCN4AP35499 1836 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 SNX16P57768 344 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 TMEM62Q0P6H9 643 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 GRB14Q14449 540 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 KRT72Q14CN4 511 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 SOWAHAQ2M3V2 549 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 DCAF4L1Q3SXM0 396 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 KHDC1Q4VXA5 237 aaKnown RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 ATG16L1Q676U5 607 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 NAIF1Q69YI7 327 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 HEATR6Q6AI08 1181 aaKnown RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 TRIM42Q8IWZ5 723 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 NDUFAF2Q8N183 169 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 OR6J1Q8NGC5 347 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 APBB2Q92870 758 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 SNX27Q96L92 541 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 C7orf26Q96N11 449 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 QKIQ96PU8 341 aaKnown RBP eCLIP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 CSPG4P5Q96PW8 444 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 DCLRE1BQ9H816 532 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 TAS2R1Q9NYW7 299 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 F5H423 210 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 LUC7L3O95232 432 aaKnown RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 TOP3BO95985 862 aaKnown RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 ZFXP17010 805 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 PTDSS1P48651 473 aaKnown RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 HSF5Q4G112 596 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 TEX44Q53QW1 395 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 NCBP2-AS2Q69YL0 99 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 NUDCD3Q8IVD9 361 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 ARID3BQ8IVW6 561 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 DEPDC1BQ8WUY9 529 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 CENPIQ92674 756 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 ANKRD27Q96NW4 1050 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 TINF2Q9BSI4 451 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 FAM167BQ9BTA0 163 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 EIF2AQ9BY44 585 aaKnown RBP14.86□□□□□ -0.03
HIF3A-202ENST00000244303 KCNK4Q9NYG8 393 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 DTLQ9NZJ0 730 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 LRRC42Q9Y546 428 aa14.86□□□□□ -0.03
HIF3A-202ENST00000244303 LMNAP02545 664 aaKnown RBP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 PDGFRBP09619 1106 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 KITP10721 976 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 HOXD8P13378 290 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 AMPD1P23109 780 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 HOXA11P31270 313 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 PEX19P40855 299 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 NR2C2P49116 596 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 OCRLQ01968 901 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 BST2Q10589 180 aaKnown RBP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 SEMA5AQ13591 1074 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 ARHGAP17Q68EM7 881 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 TRIM68Q6AZZ1 485 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms