RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
HOXC6-201ENST00000243108 PTP4A2Q12974 167 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 MESDQ14696 234 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 C8orf74Q6P047 294 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 TXNDC11Q6PKC3 985 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 C4orf50Q6ZRC1 276 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 MON1AQ86VX9 555 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 YAF2Q8IY57 180 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 BPIFB1Q8TDL5 484 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 FAM3CQ92520 227 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 CYP2S1Q96SQ9 504 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 NELL2Q99435 816 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 ZSWIM1Q9BR11 485 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 DMGDHQ9UI17 866 aaKnown RBP18.18■□□□□ 0.5
HOXC6-201ENST00000243108 R4GN57 208 aa18.18■□□□□ 0.5
HOXC6-201ENST00000243108 HELZP42694 1942 aaKnown RBP18.17■□□□□ 0.5
HOXC6-201ENST00000243108 PTPRZ1P23471 2315 aaPredicted RBP18.17■□□□□ 0.5
HOXC6-201ENST00000243108 DMXL1Q9Y485 3027 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 CLDN5O00501 218 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 DPYSL4O14531 572 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 FAM163BP0C2L3 166 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 RRM1P23921 792 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 SCARA5Q6ZMJ2 495 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 ALG3Q92685 438 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 B3GNT5Q9BYG0 378 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 ZNF518BQ9C0D4 1074 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 SPATA6Q9NWH7 488 aaPredicted RBP18.17■□□□□ 0.5
HOXC6-201ENST00000243108 STIM2Q9P246 746 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 PCDHGC3Q9UN70 934 aa18.17■□□□□ 0.5
HOXC6-201ENST00000243108 OTOL1A6NHN0 477 aaPredicted RBP18.16■□□□□ 0.5
HOXC6-201ENST00000243108 CCDC188H7C350 402 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 MAN2B1O00754 1011 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 MAP2K7O14733 419 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 SASH3O75995 380 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 CTNNA2P26232 953 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 TNFRSF8P28908 595 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 CDH5P33151 784 aaPredicted RBP18.16■□□□□ 0.5
HOXC6-201ENST00000243108 GRIK1P39086 918 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 RPS9P46781 194 aaKnown RBP18.16■□□□□ 0.5
HOXC6-201ENST00000243108 PEX5P50542 639 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 RNASE9P60153 205 aaKnown RBP18.16■□□□□ 0.5
HOXC6-201ENST00000243108 MAPRE1Q15691 268 aaKnown RBP18.16■□□□□ 0.5
HOXC6-201ENST00000243108 VSTM1Q6UX27 236 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 CCNI2Q6ZMN8 369 aaPredicted RBP18.16■□□□□ 0.5
HOXC6-201ENST00000243108 PASD1Q8IV76 773 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 CELF5Q8N6W0 485 aaKnown RBP18.16■□□□□ 0.5
HOXC6-201ENST00000243108 UBL4BQ8N7F7 174 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 MRPS31Q92665 395 aaKnown RBP18.16■□□□□ 0.5
HOXC6-201ENST00000243108 SPATA17Q96L03 361 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 FAM124BQ9H5Z6 455 aaPredicted RBP18.16■□□□□ 0.5
HOXC6-201ENST00000243108 CYP3A43Q9HB55 503 aa18.16■□□□□ 0.5
HOXC6-201ENST00000243108 DCHS1Q96JQ0 3298 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 C2orf78A6NCI8 922 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 TMEM110-MUSTN1A8MSY1 372 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 A8MXQ7 604 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 F8VP50 259 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 BRD2P25440 801 aaKnown RBP18.15■□□□□ 0.5
HOXC6-201ENST00000243108 CTNNA1P35221 906 aaKnown RBP18.15■□□□□ 0.5
HOXC6-201ENST00000243108 AVPR1AP37288 418 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 MTAPQ13126 283 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 MAP9Q49MG5 647 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 PLEKHA7Q6IQ23 1121 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 PAQR9Q6ZVX9 377 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 B3GALNT2Q8NCR0 500 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 CSGALNACT1Q8TDX6 532 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 KRT35Q92764 455 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 CHFRQ96EP1 664 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 BTBD6Q96KE9 485 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 FAM83CQ9BQN1 747 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 TDP1Q9NUW8 608 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 ADAM22Q9P0K1 906 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 UXTQ9UBK9 157 aaPredicted RBP18.15■□□□□ 0.5
HOXC6-201ENST00000243108 MRPS17Q9Y2R5 130 aaKnown RBP18.15■□□□□ 0.5
HOXC6-201ENST00000243108 GVINP1Q7Z2Y8 2422 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 CCDC66A2RUB6 948 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 PAEPP09466 180 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 CHRNB1P11230 501 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 MMP8P22894 467 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 DDX6P26196 483 aaKnown RBP eCLIP18.15■□□□□ 0.5
HOXC6-201ENST00000243108 MLLT6P55198 1093 aaPredicted RBP18.15■□□□□ 0.5
HOXC6-201ENST00000243108 GAS6Q14393 721 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 TRIM68Q6AZZ1 485 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 TFAP2BQ92481 460 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 NKD2Q969F2 451 aaPredicted RBP18.15■□□□□ 0.5
HOXC6-201ENST00000243108 KRT12Q99456 494 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 C11orf70Q9BRQ4 267 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 LMAN1LQ9HAT1 526 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 TRPC7Q9HCX4 862 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 HPS4Q9NQG7 708 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 GKN1Q9NS71 199 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 HMGXB4Q9UGU5 601 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 ANAPC7Q9UJX3 599 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 PCDHA3Q9Y5H8 950 aa18.15■□□□□ 0.5
HOXC6-201ENST00000243108 EP300Q09472 2414 aaPredicted RBP18.14■□□□□ 0.5
HOXC6-201ENST00000243108 SPECC1L-ADORA2AF8WAN1 911 aa18.14■□□□□ 0.49
HOXC6-201ENST00000243108 P4HA1P13674 534 aa18.14■□□□□ 0.49
HOXC6-201ENST00000243108 CTHP32929 405 aa18.14■□□□□ 0.49
HOXC6-201ENST00000243108 MARCKSL1P49006 195 aa18.14■□□□□ 0.49
HOXC6-201ENST00000243108 ZXDBP98169 803 aa18.14■□□□□ 0.49
HOXC6-201ENST00000243108 ORC1Q13415 861 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms