RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.33□□□□□ -0.6
CCDC170-201ENST00000239374 SAC3D1A6NKF1 404 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 MICAL2O94851 1124 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 GFAPP14136 432 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 CDK7P50613 346 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 VPS72Q15906 364 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 TAF12Q16514 161 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 ZFP1Q6P2D0 407 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 ARCQ7LC44 396 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 CLVS1Q8IUQ0 354 aaPredicted RBP11.33□□□□□ -0.6
CCDC170-201ENST00000239374 CLEC4FQ8N1N0 589 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 EPAS1Q99814 870 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 ATXN10Q9UBB4 475 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 LNPEPQ9UIQ6 1025 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 TSPAN16Q9UKR8 245 aa11.33□□□□□ -0.6
CCDC170-201ENST00000239374 C15orf38-AP3S2A0A0A6YYH1 394 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 RTN3O95197 1032 aaPredicted RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 LINGO3P0C6S8 592 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 ERVK-10P10266 1014 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 RTP1P59025 263 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 ABCE1P61221 599 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 ACAP1Q15027 740 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 AGKQ53H12 422 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 ARMC3Q5W041 872 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 TSHZ1Q6ZSZ6 1077 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 ARPINQ7Z6K5 226 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 HPS6Q86YV9 775 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 PPHLN1Q8NEY8 458 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 SERAC1Q96JX3 654 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 PAIP1Q9H074 479 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 ZNF408Q9H9D4 720 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 XPNPEP3Q9NQH7 507 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 PNPOQ9NVS9 261 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 MAP3K20Q9NYL2 800 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 HBS1LQ9Y450 684 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 MAGEB2O15479 319 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 BPGMP07738 259 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 HSPA1AP0DMV8 641 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 HSPA1BP0DMV9 641 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 UNGP13051 313 aaPredicted RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 VCLP18206 1134 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 POLD1P28340 1107 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 CLCN3P51790 818 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 NME5P56597 212 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 CCDC92Q53HC0 331 aaPredicted RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 ZNF280CQ8ND82 737 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 DGCR14Q96DF8 476 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 CHST12Q9NRB3 414 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 AAASQ9NRG9 546 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 GALNT8Q9NY28 637 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 UBIAD1Q9Y5Z9 338 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 E5RJQ4 531 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 USP12O75317 370 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 MOCS2O96007 188 aaPredicted RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 KCTD21Q4G0X4 260 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 PRAMEF18Q5VWM3 479 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 SCUBE3Q8IX30 993 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 RNF139Q8WU17 664 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 HTR3CQ8WXA8 447 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 TNIP3Q96KP6 325 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 GLIS2Q9BZE0 524 aaPredicted RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 PRMT7Q9NVM4 692 aaPredicted RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 AP4S1Q9Y587 144 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 S100BP04271 92 aaPredicted RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 TXNP10599 105 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 FGFR3P22607 806 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 CCDC153Q494R4 210 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 GLRA4Q5JXX5 417 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 SLC7A14Q8TBB6 771 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 C7orf43Q8WVR3 580 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 EBF3Q9H4W6 596 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 SSU72Q9NP77 194 aaKnown RBP11.32□□□□□ -0.6
CCDC170-201ENST00000239374 UBP1Q9NZI7 540 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 SNCAIPQ9Y6H5 919 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 MYH7P12883 1935 aa11.32□□□□□ -0.6
CCDC170-201ENST00000239374 KCNK1O00180 336 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 CDC16Q13042 620 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 DACT2Q5SW24 774 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 ANGEL2Q5VTE6 544 aaKnown RBP11.31□□□□□ -0.6
CCDC170-201ENST00000239374 BSNDQ8WZ55 320 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 ZNF229Q9UJW7 825 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 AP4B1Q9Y6B7 739 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 GOLGA8TH3BQL2 631 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 CSPG5O95196 566 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 HOXA10P31260 410 aaPredicted RBP11.31□□□□□ -0.6
CCDC170-201ENST00000239374 NDST1P52848 882 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 GDF10P55107 478 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 CCNA1P78396 465 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 USP4Q13107 963 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 DPP9Q86TI2 863 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 TNS4Q8IZW8 715 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 LENG1Q96BZ8 264 aaPredicted RBP11.31□□□□□ -0.6
CCDC170-201ENST00000239374 RNF157Q96PX1 679 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 BEGAINQ9BUH8 593 aa11.31□□□□□ -0.6
CCDC170-201ENST00000239374 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms