RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 TMEM30AQ9NV96 361 aa8.8□□□□□ -1
IFT43-201ENST00000238628 DNAJC17Q9NVM6 304 aaKnown RBP8.8□□□□□ -1
IFT43-201ENST00000238628 EIF2B4Q9UI10 523 aaKnown RBP8.8□□□□□ -1
IFT43-201ENST00000238628 SMC3Q9UQE7 1217 aa8.8□□□□□ -1
IFT43-201ENST00000238628 SNX11Q9Y5W9 270 aa8.8□□□□□ -1
IFT43-201ENST00000238628 RAD54BQ9Y620 910 aa8.8□□□□□ -1
IFT43-201ENST00000238628 SPTBN1Q01082 2364 aaKnown RBP8.79□□□□□ -1
IFT43-201ENST00000238628 FRMD3A2A2Y4 597 aa8.79□□□□□ -1
IFT43-201ENST00000238628 WASH3PC4AMC7 463 aa8.79□□□□□ -1
IFT43-201ENST00000238628 PRRT4C9JH25 899 aa8.79□□□□□ -1
IFT43-201ENST00000238628 NEDD8-MDP1E9PL57 170 aa8.79□□□□□ -1
IFT43-201ENST00000238628 K7ENP7 123 aa8.79□□□□□ -1
IFT43-201ENST00000238628 CBX4O00257 560 aa8.79□□□□□ -1
IFT43-201ENST00000238628 NEFLP07196 543 aa8.79□□□□□ -1
IFT43-201ENST00000238628 DLATP10515 647 aaKnown RBP8.79□□□□□ -1
IFT43-201ENST00000238628 TYRP14679 529 aa8.79□□□□□ -1
IFT43-201ENST00000238628 POU3F2P20265 443 aaPredicted RBP8.79□□□□□ -1
IFT43-201ENST00000238628 TXLNAP40222 546 aa8.79□□□□□ -1
IFT43-201ENST00000238628 TUBP50607 506 aa8.79□□□□□ -1
IFT43-201ENST00000238628 IL9RQ01113 521 aa8.79□□□□□ -1
IFT43-201ENST00000238628 TRPC3Q13507 836 aa8.79□□□□□ -1
IFT43-201ENST00000238628 INO80CQ6PI98 192 aaPredicted RBP8.79□□□□□ -1
IFT43-201ENST00000238628 CCDC73Q6ZRK6 1079 aa8.79□□□□□ -1
IFT43-201ENST00000238628 TPGS1Q6ZTW0 290 aa8.79□□□□□ -1
IFT43-201ENST00000238628 STXBP4Q6ZWJ1 553 aa8.79□□□□□ -1
IFT43-201ENST00000238628 HTR3DQ70Z44 454 aa8.79□□□□□ -1
IFT43-201ENST00000238628 CCDC65Q8IXS2 484 aa8.79□□□□□ -1
IFT43-201ENST00000238628 B3GALNT2Q8NCR0 500 aa8.79□□□□□ -1
IFT43-201ENST00000238628 CADM4Q8NFZ8 388 aa8.79□□□□□ -1
IFT43-201ENST00000238628 HIC2Q96JB3 615 aa8.79□□□□□ -1
IFT43-201ENST00000238628 CNDP2Q96KP4 475 aaKnown RBP8.79□□□□□ -1
IFT43-201ENST00000238628 MRGPRX1Q96LB2 322 aa8.79□□□□□ -1
IFT43-201ENST00000238628 CLIC6Q96NY7 704 aa8.79□□□□□ -1
IFT43-201ENST00000238628 DUSP9Q99956 384 aaKnown RBP8.79□□□□□ -1
IFT43-201ENST00000238628 ARHGAP9Q9BRR9 750 aa8.79□□□□□ -1
IFT43-201ENST00000238628 BBS2Q9BXC9 721 aa8.79□□□□□ -1
IFT43-201ENST00000238628 DPH1Q9BZG8 443 aa8.79□□□□□ -1
IFT43-201ENST00000238628 KIAA1586Q9HCI6 787 aa8.79□□□□□ -1
IFT43-201ENST00000238628 CD248Q9HCU0 757 aa8.79□□□□□ -1
IFT43-201ENST00000238628 STARD5Q9NSY2 213 aa8.79□□□□□ -1
IFT43-201ENST00000238628 COMMD8Q9NX08 183 aa8.79□□□□□ -1
IFT43-201ENST00000238628 PPP4R2Q9NY27 417 aa8.79□□□□□ -1
IFT43-201ENST00000238628 IL37Q9NZH6 218 aa8.79□□□□□ -1
IFT43-201ENST00000238628 WDR35Q9P2L0 1181 aa8.79□□□□□ -1
IFT43-201ENST00000238628 CLCA2Q9UQC9 943 aa8.79□□□□□ -1
IFT43-201ENST00000238628 SRPRBQ9Y5M8 271 aaKnown RBP8.79□□□□□ -1
IFT43-201ENST00000238628 CLIC4Q9Y696 253 aa8.79□□□□□ -1
IFT43-201ENST00000238628 ICE1Q9Y2F5 2266 aa8.79□□□□□ -1
IFT43-201ENST00000238628 FLNCQ14315 2725 aa8.79□□□□□ -1
IFT43-201ENST00000238628 ATP8B3O60423 1300 aa8.79□□□□□ -1
IFT43-201ENST00000238628 METTL12A8MUP2 240 aa8.78□□□□□ -1
IFT43-201ENST00000238628 H0Y8X5 98 aa8.78□□□□□ -1
IFT43-201ENST00000238628 GFRA2O00451 464 aa8.78□□□□□ -1
IFT43-201ENST00000238628 CACNG3O60359 315 aa8.78□□□□□ -1
IFT43-201ENST00000238628 CISD3P0C7P0 127 aa8.78□□□□□ -1
IFT43-201ENST00000238628 ZDHHC11BP0C7U3 371 aa8.78□□□□□ -1
IFT43-201ENST00000238628 STAT6P42226 847 aa8.78□□□□□ -1
IFT43-201ENST00000238628 DGKGP49619 791 aa8.78□□□□□ -1
IFT43-201ENST00000238628 AFF3P51826 1226 aaKnown RBP8.78□□□□□ -1
IFT43-201ENST00000238628 SLC5A3P53794 718 aa8.78□□□□□ -1
IFT43-201ENST00000238628 MYL6P60660 151 aa8.78□□□□□ -1
IFT43-201ENST00000238628 RABEP1Q15276 862 aa8.78□□□□□ -1
IFT43-201ENST00000238628 TEAD4Q15561 434 aa8.78□□□□□ -1
IFT43-201ENST00000238628 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
IFT43-201ENST00000238628 KDM7AQ6ZMT4 941 aa8.78□□□□□ -1
IFT43-201ENST00000238628 CCDC81Q6ZN84 652 aa8.78□□□□□ -1
IFT43-201ENST00000238628 METTL3Q86U44 580 aaKnown RBP8.78□□□□□ -1
IFT43-201ENST00000238628 FAM26EQ8N5C1 309 aa8.78□□□□□ -1
IFT43-201ENST00000238628 IGSF8Q969P0 613 aa8.78□□□□□ -1
IFT43-201ENST00000238628 CCDC127Q96BQ5 260 aa8.78□□□□□ -1
IFT43-201ENST00000238628 KLF16Q9BXK1 252 aaPredicted RBP8.78□□□□□ -1
IFT43-201ENST00000238628 ITM2CQ9NQX7 267 aa8.78□□□□□ -1
IFT43-201ENST00000238628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.78□□□□□ -1
IFT43-201ENST00000238628 TLR8Q9NR97 1041 aaKnown RBP8.78□□□□□ -1
IFT43-201ENST00000238628 WSB2Q9NYS7 404 aaPredicted RBP8.78□□□□□ -1
IFT43-201ENST00000238628 FBXO2Q9UK22 296 aaPredicted RBP8.78□□□□□ -1
IFT43-201ENST00000238628 LSM7Q9UK45 103 aaKnown RBP8.78□□□□□ -1
IFT43-201ENST00000238628 ANKRD6Q9Y2G4 727 aa8.78□□□□□ -1
IFT43-201ENST00000238628 NBPF19A0A087WUL8 3843 aa8.77□□□□□ -1
IFT43-201ENST00000238628 FAM92AA1XBS5 289 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 TLR5O60602 858 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 PHACTR2O75167 634 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 AP1G2O75843 785 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 CLSTN1O94985 981 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 STAU1O95793 577 aaKnown RBP8.77□□□□□ -1.01
IFT43-201ENST00000238628 TBX18O95935 607 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 MPOP05164 745 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 OXTRP30559 389 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 ATICP31939 592 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 ATP5C1P36542 298 aaKnown RBP8.77□□□□□ -1.01
IFT43-201ENST00000238628 ACADVLP49748 655 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 CDH8P55286 799 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 GOLGA8FQ08AF8 430 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 GOLGA8DPQ0D2H9 430 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 STARD3Q14849 445 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 PSMD6Q15008 389 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 SNRNP35Q16560 246 aaKnown RBP8.77□□□□□ -1.01
IFT43-201ENST00000238628 XKR5Q6UX68 686 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 PAQR9Q6ZVX9 377 aa8.77□□□□□ -1.01
IFT43-201ENST00000238628 FAM35AQ86V20 835 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms