RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 ZFP28Q8NHY6 868 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 C17orf50Q8WW18 174 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 ZNF668Q96K58 619 aaPredicted RBP10.67□□□□□ -0.7
FOXN1-201ENST00000226247 SPATA17Q96L03 361 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 FBXL18Q96ME1 805 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 TMEM39BQ9GZU3 492 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 RAB6CQ9H0N0 254 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 POLR3FQ9H1D9 316 aaPredicted RBP10.67□□□□□ -0.7
FOXN1-201ENST00000226247 SMYD2Q9NRG4 433 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 DDX56Q9NY93 547 aaKnown RBP10.67□□□□□ -0.7
FOXN1-201ENST00000226247 SLX4Q8IY92 1834 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 E9PBE3 544 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 EXTL3O43909 919 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 KLHL41O60662 606 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 CSH1P0DML2 217 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 CSH2P0DML3 217 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 CPOXP36551 454 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 CDH6P55285 790 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 OXCT1P55809 520 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 ROR1Q01973 937 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 ITGA7Q13683 1181 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 TLR1Q15399 786 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 SH2D5Q6ZV89 423 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 ARFGAP1Q8N6T3 406 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 DGCR14Q96DF8 476 aaKnown RBP10.67□□□□□ -0.7
FOXN1-201ENST00000226247 RMDN3Q96TC7 470 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 IL1RAPL1Q9NZN1 696 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 POMPQ9Y244 141 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 DTNAQ9Y4J8 743 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 NR2E3Q9Y5X4 410 aa10.67□□□□□ -0.7
FOXN1-201ENST00000226247 KLRG2A4D1S0 409 aaPredicted RBP10.66□□□□□ -0.7
FOXN1-201ENST00000226247 ZC3H11AO75152 810 aaKnown RBP eCLIP10.66□□□□□ -0.7
FOXN1-201ENST00000226247 HALP42357 657 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 MYL6P60660 151 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 CD300CQ08708 224 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 LPIN1Q14693 890 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 MYLK3Q32MK0 819 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 MAP1SQ66K74 1059 aaPredicted RBP10.66□□□□□ -0.7
FOXN1-201ENST00000226247 TAS1R3Q7RTX0 852 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 PODNQ7Z5L7 613 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 C4orf19Q8IY42 314 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 TMEM130Q8N3G9 435 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 PHTF2Q8N3S3 785 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 WDTC1Q8N5D0 677 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 STKLD1Q8NE28 680 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 PGBD4Q96DM1 585 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 ATXN7L3BQ96GX2 97 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 C7orf26Q96N11 449 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 PAIP1Q9H074 479 aaKnown RBP10.66□□□□□ -0.7
FOXN1-201ENST00000226247 GPATCH2LQ9NWQ4 482 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 FBXO40Q9UH90 709 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 CDH22Q9UJ99 828 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 CTDP1Q9Y5B0 961 aaPredicted RBP10.66□□□□□ -0.7
FOXN1-201ENST00000226247 TEX264Q9Y6I9 313 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 K7ERI5 159 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 SIN3BO75182 1162 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 RFPL1O75677 317 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 CD1EP15812 388 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 TCN1P20061 433 aaPredicted RBP10.66□□□□□ -0.7
FOXN1-201ENST00000226247 SNRPFP62306 86 aaKnown RBP10.66□□□□□ -0.7
FOXN1-201ENST00000226247 RPS6P62753 249 aaKnown RBP10.66□□□□□ -0.7
FOXN1-201ENST00000226247 TMEM259Q4ZIN3 620 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 DENND1BQ6P3S1 775 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 GAB3Q8WWW8 586 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 MOCOSQ96EN8 888 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 NACA2Q9H009 215 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 ST6GALNAC4Q9H4F1 302 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 CISHQ9NSE2 258 aa10.66□□□□□ -0.7
FOXN1-201ENST00000226247 E7ESA3 106 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 KRT38O76015 456 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 KRT19P08727 400 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 GSTT2P0CG29 244 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 GSTT2BP0CG30 244 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 GRIA1P42261 906 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 RAP1GAPP47736 663 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 TFAMQ00059 246 aaKnown RBP10.65□□□□□ -0.7
FOXN1-201ENST00000226247 SEPT6Q14141 434 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 ANKRD20A4Q4UJ75 823 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 C6orf52Q5T4I8 152 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 BBS12Q6ZW61 710 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 MOB2Q70IA6 237 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 PTAR1Q7Z6K3 402 aaPredicted RBP10.65□□□□□ -0.7
FOXN1-201ENST00000226247 TTC13Q8NBP0 860 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 DEPDC1BQ8WUY9 529 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 CENPOQ9BU64 300 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 MTMR12Q9C0I1 747 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 PCDH18Q9HCL0 1135 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 GPAMQ9HCL2 828 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 TBC1D22BQ9NU19 505 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 TMX2Q9Y320 296 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 TRIM17Q9Y577 477 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 GOLGA8QA0A0J9YX86 632 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 GOLGA8OA6NCC3 632 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 TMEM247A6NEH6 219 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 C3orf70A6NLC5 250 aaPredicted RBP10.65□□□□□ -0.7
FOXN1-201ENST00000226247 GOLGA8NF8WBI6 632 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 VILLO15195 856 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 BPGMP07738 259 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 KRT7P08729 469 aa10.65□□□□□ -0.7
FOXN1-201ENST00000226247 MIPP30301 263 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms