RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 KCNK1O00180 336 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 HLA-DPA1P20036 260 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 SSTR1P30872 391 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 HNRNPH1P31943 449 aaKnown RBP11.84□□□□□ -0.51
NOD1-201ENST00000222823 DAB2IPQ5VWQ8 1189 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 CEP41Q9BYV8 373 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 ZCWPW1Q9H0M4 648 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 ZNF556Q9HAH1 456 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 SYTL2Q9HCH5 934 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 VANGL2Q9ULK5 521 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 CLCA2Q9UQC9 943 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 V9GYQ6 96 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 O00370 1275 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 PLSCR1O15162 318 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 HMGCRP04035 888 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 RBP1P09455 135 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 GHRP10912 638 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 MIPP30301 263 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 FBXW4P57775 412 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 SLC9A9Q8IVB4 645 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 GPC2Q8N158 579 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 DDI1Q8WTU0 396 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 FAM162AQ96A26 154 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 NMRK2Q9NPI5 230 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 DNPEPQ9ULA0 475 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 ADM5C9JUS6 153 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 TM9SF1O15321 606 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 MICAL2O94851 1124 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 URODP06132 367 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 RHOCP08134 193 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 NQO1P15559 274 aaKnown RBP11.83□□□□□ -0.52
NOD1-201ENST00000222823 UBA1P22314 1058 aaKnown RBP11.83□□□□□ -0.52
NOD1-201ENST00000222823 AMPD1P23109 780 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 VHLP40337 213 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 CCDC15Q0P6D6 951 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 ZSWIM2Q8NEG5 633 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 SLC2A14Q8TDB8 520 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 ZNF333Q96JL9 665 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 C17orf80Q9BSJ5 609 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 CLPBQ9H078 707 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 NEUROG2Q9H2A3 272 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 DNAJC18Q9H819 358 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 CRTAMO95727 393 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 BGNP21810 368 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 SERPINB5P36952 375 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 SCTRP47872 440 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 ZNF844Q08AG5 666 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 TMEM154Q6P9G4 183 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 MTDHQ86UE4 582 aaKnown RBP11.83□□□□□ -0.52
NOD1-201ENST00000222823 DEFB106AQ8N104 65 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 HTR3CQ8WXA8 447 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 CDCA5Q96FF9 252 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 SLC7A5P2Q9GIP4 190 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 VAV3Q9UKW4 847 aa11.83□□□□□ -0.52
NOD1-201ENST00000222823 CNTNAP2Q9UHC6 1331 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 MAGEB16A2A368 324 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 F8VP50 259 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 TBC1D4O60343 1298 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 GJB6O95452 261 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 SERPINF2P08697 491 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 SLURP2P0DP57 97 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 TFE3P19532 575 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 ITGALP20701 1170 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 SCNN1BP51168 640 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 CSHL1Q14406 222 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 POU6F1Q14863 301 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 RCN1Q15293 331 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 SPDYCQ5MJ68 293 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 ZNF572Q7Z3I7 529 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 TLK2Q86UE8 772 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 ZNF410Q86VK4 478 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 WDR18Q9BV38 432 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 PDGFCQ9NRA1 345 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 KANSL3Q9P2N6 904 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 SFMBT1Q9UHJ3 866 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 SALL4Q9UJQ4 1053 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 DOT1LQ8TEK3 1739 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 SLCO1B7G3V0H7 640 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 CBX4O00257 560 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 TGFB1I1O43294 461 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 UBOX5O94941 541 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 GP5P40197 560 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 RHOAP61586 193 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 DLG4P78352 724 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 GTF2BQ00403 316 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 PLIN5Q00G26 463 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 CDH17Q12864 832 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 ACAP1Q15027 740 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 TEX9Q8N6V9 391 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 MTG1Q9BT17 334 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 SPATA16Q9BXB7 569 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 ACP6Q9NPH0 428 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 CHST7Q9NS84 486 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 FZD1Q9UP38 647 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 NCANO14594 1321 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 HNRNPRO43390 633 aaKnown RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 H2AFYO75367 372 aaKnown RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 GLP2RO95838 553 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 MZF1P28698 734 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 ADCYAP1R1P41586 468 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms