RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 DPEP3Q9H4B8 488 aa15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 YY1AP1Q9H869 796 aa15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 ARL8BQ9NVJ2 186 aa15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 PPEF2O14830 753 aa15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 FASTKD1Q53R41 847 aaKnown RBP15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 N4BP2L1Q5TBK1 243 aaPredicted RBP15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 CAPRIN2Q6IMN6 1127 aaKnown RBP15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 ARFGAP1Q8N6T3 406 aa15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 STKLD1Q8NE28 680 aa15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 TTC8Q8TAM2 541 aa15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 C10orf82Q8WW14 230 aa15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 EBNA1BP2Q99848 306 aaKnown RBP15.43■□□□□ 0.06
UBE2D4-201ENST00000222402 IQCF3P0C7M6 154 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 MLH1P40692 756 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 NR2C2P49116 596 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 PIGZQ86VD9 579 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 TTC30AQ86WT1 665 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 METTL23Q86XA0 190 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 ZNF398Q8TD17 642 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 EIF2AQ9BY44 585 aaKnown RBP15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 BATF3Q9NR55 127 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 MCM8Q9UJA3 840 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 TYROBPO43914 113 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 STAMBPO95630 424 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 ANKRD52Q8NB46 1076 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 YIPF3Q9GZM5 350 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 LOXHD1Q8IVV2 1947 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 CFLARO15519 480 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 GLRA3O75311 464 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 AP1G2O75843 785 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 TKTL1P51854 596 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 PRAMEF19Q5SWL8 479 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 TRMT10BQ6PF06 316 aaKnown RBP15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 RPAINQ86UA6 219 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 ALYREFQ86V81 257 aaKnown RBP15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 UNC93AQ86WB7 457 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 PPTC7Q8NI37 304 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 EPAS1Q99814 870 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 TRIM56Q9BRZ2 755 aaKnown RBP15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 UBP1Q9NZI7 540 aa15.42■□□□□ 0.06
UBE2D4-201ENST00000222402 IGKV6-21A0A0C4DH24 114 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 DFFAO00273 331 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 UGT1A9O60656 530 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 MOCS2O96007 188 aaPredicted RBP15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 CYP2B6P20813 491 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 ARHGAP1Q07960 439 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 MGAT5Q09328 741 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 PYROXD2Q8N2H3 581 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 UGT1A7Q9HAW7 530 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 UGT1A10Q9HAW8 530 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 UGT1A8Q9HAW9 530 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 SLC24A3Q9HC58 644 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 GBA2Q9HCG7 927 aaPredicted RBP15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 SCOCQ9UIL1 159 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 HCRTO43612 131 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 SKAP2O75563 359 aaPredicted RBP15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 PSMB4P28070 264 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 SPRP35270 261 aaPredicted RBP15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 ABCG1P45844 678 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 KPNB1Q14974 876 aaKnown RBP15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 PARP6Q2NL67 630 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 WASHC2DQ5SRD0 308 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 ITPRIPL1Q6GPH6 555 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 CCNYL1Q8N7R7 359 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 UBR7Q8N806 425 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 DENND1AQ8TEH3 1009 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 RNF139Q8WU17 664 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 GTF3C2Q8WUA4 911 aaPredicted RBP15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 TEKT4Q8WW24 435 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 CSPG4P5Q96PW8 444 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 ABHD16BQ9H3Z7 469 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 PTPRHQ9HD43 1115 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 KRT82Q9NSB4 513 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 C20orf96Q9NUD7 363 aaPredicted RBP15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 CLDN5O00501 218 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 NEMP1O14524 444 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 GNAT1P11488 350 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 CALRP27797 417 aaKnown RBP15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 HIC1Q14526 733 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 PAN2Q504Q3 1202 aaKnown RBP15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 SLC26A7Q8TE54 656 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 PRKAG3Q9UGI9 489 aa15.41■□□□□ 0.06
UBE2D4-201ENST00000222402 A0A0A0MRY4 1105 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 CXorf49A8MYA2 514 aaPredicted RBP15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 METTL18O95568 372 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 OAS1P00973 400 aaKnown RBP15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 LRRC36Q1X8D7 754 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 FAM228AQ86W67 206 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 SPATA13Q96N96 652 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 NMUR2Q9GZQ4 415 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 PRDM12Q9H4Q4 367 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 SSU72Q9NP77 194 aaKnown RBP15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 NDE1Q9NXR1 346 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 CPSF2Q9P2I0 782 aaKnown RBP15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 BRWD3Q6RI45 1802 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 STRNO43815 780 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 ERVK-10P10266 1014 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 GRIA1P42261 906 aa15.4■□□□□ 0.06
UBE2D4-201ENST00000222402 AP2B1P63010 937 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms