RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 ATP5HO75947 161 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 NCF2P19878 526 aaPredicted RBP13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 CCNG2Q16589 344 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 CYP4X1Q8N118 509 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 ARHGAP18Q8N392 663 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 TTC13Q8NBP0 860 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 MCUQ8NE86 351 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 PHF12Q96QT6 1004 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 LGMNQ99538 433 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 CYTH4Q9UIA0 394 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 PSTPIP1O43586 416 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 FAM155BO75949 473 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 KDELR1P24390 212 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 CA9Q16790 459 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 RASSF3Q86WH2 238 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 RYBPQ8N488 228 aaPredicted RBP13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 ZMAT2Q96NC0 199 aaKnown RBP13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 PDP2Q9P2J9 529 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 EVPLQ92817 2033 aa13.35□□□□□ -0.27
PCDHB4-201ENST00000194152 CNMDO75829 334 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 KRT37O76014 449 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 LMNAP02545 664 aaKnown RBP13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 MCF2P10911 925 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 BDNFP23560 247 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 CD52P31358 61 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 PBX3P40426 434 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 PTGIRP43119 386 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 ASPAP45381 313 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 TKTL1P51854 596 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 VCPP55072 806 aaKnown RBP13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 LBRQ14739 615 aaKnown RBP13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 MYBPC3Q14896 1274 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 GRAMD1BQ3KR37 738 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 SLC44A4Q53GD3 710 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 KCNK16Q96T55 309 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 SIKE1Q9BRV8 207 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 VTA1Q9NP79 307 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 DDX56Q9NY93 547 aaKnown RBP13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 BTNL10A8MVZ5 291 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 FSCN2O14926 492 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 SPTLC1O15269 473 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 RPL22P35268 128 aaKnown RBP13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 AFF1P51825 1210 aaKnown RBP13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 GBE1Q04446 702 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 MPP3Q13368 585 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 CNPY1Q3B7I2 92 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 PIGZQ86VD9 579 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 CCDC124Q96CT7 223 aaKnown RBP13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 TTC25Q96NG3 672 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 FAM111AQ96PZ2 611 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 ARHGAP39Q9C0H5 1083 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 AP4E1Q9UPM8 1137 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 LRRC42Q9Y546 428 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 STRNO43815 780 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 TMCC1O94876 653 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 HAUS5O94927 633 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 ACADSP16219 412 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 SERPINB6P35237 376 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 FLT3LGP49771 235 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 SLC26A2P50443 739 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 GALK1P51570 392 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 RTP1P59025 263 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 KDSRQ06136 332 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 SH3D19Q5HYK7 790 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 PPP4R1Q8TF05 950 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 PDCD6IPQ8WUM4 868 aaKnown RBP13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 CDKL2Q92772 493 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 UBQLN1Q9UMX0 589 aaKnown RBP13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 CDY2AQ9Y6F7 541 aa13.34□□□□□ -0.27
PCDHB4-201ENST00000194152 LIASO43766 372 aa13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 ENDOD1O94919 500 aa13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 GM2AP17900 193 aa13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 IGFBP6P24592 240 aaPredicted RBP13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 PGM1P36871 562 aa13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 DUSP28Q4G0W2 176 aa13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 METTL23Q86XA0 190 aa13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 RNF139Q8WU17 664 aa13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 CNPY3Q9BT09 278 aa13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 SNRNP25Q9BV90 132 aaKnown RBP13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 TDRKHQ9Y2W6 561 aaKnown RBP13.33□□□□□ -0.27
PCDHB4-201ENST00000194152 SMIM28A0A1B0GU29 152 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 TCRBV7S3A2A0A539 114 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 CES2O00748 559 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 GRIN3BO60391 1043 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 IMPDH2P12268 514 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 CYP2F1P24903 491 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 ETFBP38117 255 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 ARFIP2P53365 341 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 TARBP2Q15633 366 aaKnown RBP13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 TSHZ1Q6ZSZ6 1077 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 RAET1EQ8TD07 263 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 TNIP3Q96KP6 325 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 SERPINB12Q96P63 405 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 ZFYVE28Q9HCC9 887 aa13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 MYH9P35579 1960 aaKnown RBP13.33□□□□□ -0.28
PCDHB4-201ENST00000194152 SMAPO00193 183 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms