RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 LRRC55Q6ZSA7 311 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 NPLOC4Q8TAT6 608 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 LENG9Q96B70 501 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 SHOC2Q9UQ13 582 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 SPECC1L-ADORA2AF8WAN1 911 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 GYG2O15488 501 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 DCTN3O75935 186 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 NCKAP1LP55160 1127 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 POU4F1Q01851 419 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 KCNT2Q6UVM3 1135 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 ATP6V1G3Q96LB4 118 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 TUBB6Q9BUF5 446 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 EML4Q9HC35 981 aaKnown RBP11.73□□□□□ -0.53
PKP2-201ENST00000070846 SPASTQ9UBP0 616 aa11.73□□□□□ -0.53
PKP2-201ENST00000070846 SHPRHQ149N8 1683 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 IGLV3-22A0A075B6J6 115 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 STX3Q13277 289 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 RRM2BQ7LG56 351 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 TTC7BQ86TV6 843 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 FAM35AQ86V20 835 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 ZSWIM2Q8NEG5 633 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 RFWD2Q8NHY2 731 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 SEPT3Q9UH03 358 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 KIF13AQ9H1H9 1805 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 TARSL2A2RTX5 802 aaKnown RBP11.72□□□□□ -0.53
PKP2-201ENST00000070846 PBX3P40426 434 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 LRRC74AQ0VAA2 488 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 MFSD4BQ5TF39 518 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 TRMT11Q7Z4G4 463 aaKnown RBP11.72□□□□□ -0.53
PKP2-201ENST00000070846 SH2D3CQ8N5H7 860 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 SKA1Q96BD8 255 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 FAM161BQ96MY7 647 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 OMDQ99983 421 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 LNPEPQ9UIQ6 1025 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 ADAM28Q9UKQ2 775 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 CAND2O75155 1236 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 USP12O75317 370 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 SUPT7LO94864 414 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 MYL2P10916 166 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 ITGB6P18564 788 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 PSEN1P49768 467 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 TAF10Q12962 218 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 MTA1Q13330 715 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 C9orf57Q5W0N0 161 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 FUT10Q6P4F1 479 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 CCNI2Q6ZMN8 369 aaPredicted RBP11.72□□□□□ -0.53
PKP2-201ENST00000070846 RASAL3Q86YV0 1011 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 ZNF296Q8WUU4 475 aaPredicted RBP11.72□□□□□ -0.53
PKP2-201ENST00000070846 LRRC37BQ96QE4 947 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 NIFKQ9BYG3 293 aaKnown RBP11.72□□□□□ -0.53
PKP2-201ENST00000070846 C11orf49Q9H6J7 331 aa11.72□□□□□ -0.53
PKP2-201ENST00000070846 MAFBQ9Y5Q3 323 aaPredicted RBP11.72□□□□□ -0.53
PKP2-201ENST00000070846 NCF1BA6NI72 391 aaPredicted RBP11.71□□□□□ -0.53
PKP2-201ENST00000070846 NCF1CA8MVU1 366 aaPredicted RBP11.71□□□□□ -0.53
PKP2-201ENST00000070846 HAUS5O94927 633 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 IL1BP01584 269 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 NCF1P14598 390 aaPredicted RBP11.71□□□□□ -0.53
PKP2-201ENST00000070846 RPL17P18621 184 aaKnown RBP11.71□□□□□ -0.53
PKP2-201ENST00000070846 ACOX1Q15067 660 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 ACBD5Q5T8D3 534 aaPredicted RBP11.71□□□□□ -0.53
PKP2-201ENST00000070846 UGT3A1Q6NUS8 523 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 PKN3Q6P5Z2 889 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 NAT16Q8N8M0 369 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 SPATA20Q8TB22 786 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 FBXO25Q8TCJ0 367 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 APBB2Q92870 758 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 MIR1-1HGQ9H1L0 117 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 RUBCNLQ9H714 662 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 PNMA8BQ9ULN7 279 aaPredicted RBP11.71□□□□□ -0.53
PKP2-201ENST00000070846 SOAT2O75908 522 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 DOK6Q6PKX4 331 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 GET4Q7L5D6 327 aaPredicted RBP11.71□□□□□ -0.53
PKP2-201ENST00000070846 NPAS4Q8IUM7 802 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 ZNF557Q8N988 423 aaPredicted RBP11.71□□□□□ -0.53
PKP2-201ENST00000070846 FBXO36Q8NEA4 188 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 HTR3CQ8WXA8 447 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 TNFRSF25Q93038 417 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 ZCWPW1Q9H0M4 648 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 IARS2Q9NSE4 1012 aaKnown RBP11.71□□□□□ -0.53
PKP2-201ENST00000070846 ADAM21Q9UKJ8 722 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 GRID1Q9ULK0 1009 aa11.71□□□□□ -0.53
PKP2-201ENST00000070846 UNCXA6NJT0 531 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 ARVCFO00192 962 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 TSPAN1O60635 241 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 OPHN1O60890 802 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 GLP2RO95838 553 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 PAX3P23760 479 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 GLRBP48167 497 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 PHEXP78562 749 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 WASHC5Q12768 1159 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 CAMK2GQ13555 558 aaPredicted RBP11.71□□□□□ -0.54
PKP2-201ENST00000070846 GPR158Q5T848 1215 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 PPP1R26Q5T8A7 1209 aaPredicted RBP11.71□□□□□ -0.54
PKP2-201ENST00000070846 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.71□□□□□ -0.54
PKP2-201ENST00000070846 SHC3Q92529 594 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 ARL8AQ96BM9 186 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 Q9H521 79 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 CAPN10Q9HC96 672 aa11.71□□□□□ -0.54
PKP2-201ENST00000070846 IFRD1O00458 451 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms