RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 DMGDHQ9UI17 866 aaKnown RBP23.78■■□□□ 1.4
TARBP1-201ENST00000040877 hCG_2014768A0A024R1R8 64 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 ZBTB39O15060 712 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 GP5P40197 560 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 TUBP50607 506 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 KLC1Q07866 573 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 TADA1Q96BN2 335 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 ATP13A1Q9HD20 1204 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 SCN3BQ9NY72 215 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 HEY2Q9UBP5 337 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 HNRNPH1P31943 449 aaKnown RBP23.78■■□□□ 1.4
TARBP1-201ENST00000040877 KCNK18Q7Z418 384 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 ANKRD63C9JTQ0 380 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 F8W810 466 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 SKAP2O75563 359 aaPredicted RBP23.78■■□□□ 1.4
TARBP1-201ENST00000040877 LTFP02788 710 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 PGAM1P18669 254 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 OR1E1P30953 314 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 SPANXN3Q5MJ09 141 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 GRTP1Q5TC63 336 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 ERAP2Q6P179 960 aa23.78■■□□□ 1.4
TARBP1-201ENST00000040877 THUMPD3Q9BV44 507 aaKnown RBP23.78■■□□□ 1.4
TARBP1-201ENST00000040877 ZCCHC2Q9C0B9 1178 aaKnown RBP23.78■■□□□ 1.4
TARBP1-201ENST00000040877 MAFO75444 373 aaPredicted RBP23.77■■□□□ 1.4
TARBP1-201ENST00000040877 SH3GL1Q99961 368 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 WDR41Q9HAD4 459 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 RBAK-RBAKDNI3L0D1 243 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 APOC4-APOC2K7ER74 178 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 APOA1P02647 267 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 APOC2P02655 101 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 PSMA4P25789 261 aaKnown RBP23.77■■□□□ 1.4
TARBP1-201ENST00000040877 RTP1P59025 263 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 KATNAL2Q8IYT4 538 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 CERS5Q8N5B7 392 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 COPS7BQ9H9Q2 264 aaPredicted RBP23.77■■□□□ 1.4
TARBP1-201ENST00000040877 TMEM150BA6NC51 233 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 KCNA4P22459 653 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 PABPC1LQ4VXU2 614 aaKnown RBP23.77■■□□□ 1.4
TARBP1-201ENST00000040877 ZBTB45Q96K62 511 aaPredicted RBP23.77■■□□□ 1.4
TARBP1-201ENST00000040877 CNDP1Q96KN2 507 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 DGKIO75912 1065 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 LAYNQ6UX15 382 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 NT5DC3Q86UY8 548 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 ABCC13Q9NSE7 274 aa23.77■■□□□ 1.4
TARBP1-201ENST00000040877 TCN1P20061 433 aaPredicted RBP23.76■■□□□ 1.39
TARBP1-201ENST00000040877 KLRC2P26717 231 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 STARD3Q14849 445 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 FOXR2Q6PJQ5 311 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 SENP8Q96LD8 212 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 TSPAN18Q96SJ8 248 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 IL1RL2Q9HB29 575 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 UTP6Q9NYH9 597 aaKnown RBP23.76■■□□□ 1.39
TARBP1-201ENST00000040877 RRP1BQ14684 758 aaKnown RBP23.76■■□□□ 1.39
TARBP1-201ENST00000040877 CNGA2Q16280 664 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 MYCBPAPQ8TBZ2 947 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 LRRC4BQ9NT99 713 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 CTNNAL1Q9UBT7 734 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 TGM3Q08188 693 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 DDX39BQ13838 428 aaKnown RBP23.76■■□□□ 1.39
TARBP1-201ENST00000040877 CCDC153Q494R4 210 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 DNAJC9Q8WXX5 260 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 HAS1Q92839 578 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 LRRC39Q96DD0 335 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 HSFY1Q96LI6 401 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 HNRNPCP07910 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
TARBP1-201ENST00000040877 MLNP12872 115 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 GLRA2P23416 452 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 PDPK2PQ6A1A2 396 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 P3H2Q8IVL5 708 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 TEX9Q8N6V9 391 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 CYGBQ8WWM9 190 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 ADAM2Q99965 735 aa23.76■■□□□ 1.39
TARBP1-201ENST00000040877 KRT87PA6NCN2 255 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 OVGP1Q12889 678 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 CBWD6Q4V339 395 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 CBWD3Q5JTY5 395 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 CBWD5Q5RIA9 395 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 PPP4R4Q6NUP7 873 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 LENG9Q96B70 501 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 CRABP2P29373 138 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 NOS2P35228 1153 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 LPCAT1Q8NF37 534 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 ERI2A8K979 691 aaKnown RBP23.75■■□□□ 1.39
TARBP1-201ENST00000040877 IRF6O14896 467 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 ZNF7P17097 686 aaPredicted RBP23.75■■□□□ 1.39
TARBP1-201ENST00000040877 MPP6Q9NZW5 540 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 ATRNO75882 1429 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 MAN1A2O60476 641 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 MIPP30301 263 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 MFSD7Q6UXD7 560 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 SCUBE3Q8IX30 993 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 CCDC33Q8N5R6 958 aa23.75■■□□□ 1.39
TARBP1-201ENST00000040877 IGSF6O95976 241 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 CDH8P55286 799 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 DAB2P98082 770 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 LRRC38Q5VT99 294 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 MAF1Q9H063 256 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 FGF10O15520 208 aaPredicted RBP23.74■■□□□ 1.39
TARBP1-201ENST00000040877 GLI1P08151 1106 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 CRY2Q49AN0 593 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms