RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 BpgmP15327 259 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Rps6ka3P18654 740 aaKnown RBP13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Hoxc10P31257 342 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Atp6v0d1P51863 351 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Meaf6Q2VPQ9 191 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Gpd1lQ3ULJ0 351 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Nlrc4Q3UP24 1024 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Nxpe4Q52KP5 543 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Mapk4Q6P5G0 583 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Abhd10Q6PE15 297 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Chst10Q6PGK7 356 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Sort1Q6PHU5 825 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Efr3bQ6ZQ18 817 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Usp1Q8BJQ2 784 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Anapc5Q8BTZ4 740 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Gm6367Q8C6L9 287 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Zfp62Q8C827 914 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Rnh1Q91VI7 456 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 FdpsQ920E5 353 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Sytl1Q99N80 567 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Fam3aQ9D8T0 230 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Ube4bQ9ES00 1173 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Tmod2Q9JKK7 351 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Cul3Q9JLV5 768 aa13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 QkiQ9QYS9 341 aaKnown RBP13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.53□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Zfp105G3X9I0 524 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Olfm1O88998 485 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 InvsO89019 1062 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Fdft1P53798 416 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Morf4l1P60762 362 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Nsun2Q1HFZ0 757 aaKnown RBP13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Slc38a5Q3U1J0 479 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Otol1Q4ZJM7 482 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ccdc151Q8BSN3 593 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 AA792892Q8C6S1 278 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Uba3Q8C878 462 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Pacs1Q8K212 961 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Slc36a1Q8K4D3 475 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 ChiaQ91XA9 473 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Asb7Q91ZU0 318 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ndufaf1Q9CWX2 328 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Dcp2Q9CYC6 422 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Katnal2Q9D3R6 539 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 4930513O06RikQ9D549 161 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Prorsd1Q9D820 169 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Gfra4Q9JJT2 260 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Kcnq4Q9JK97 696 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Bace2Q9JL18 514 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Spag6Q9JLI7 507 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Piwil1Q9JMB7 862 aa13.52□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Fibcd1A2AV25 459 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Mroh4G3X8W1 983 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Hcn3O88705 779 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Mcpt1P11034 246 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Cyp2b10P12791 500 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Crabp2P22935 138 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 LdlrP35951 862 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 MipP51180 263 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Rpl10aP53026 217 aaKnown RBP13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Foxn1Q61575 648 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Hsph1Q61699 858 aaKnown RBP13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Scube1Q6NZL8 1018 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Mbtd1Q6P5G3 631 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Gucy2gQ6TL19 1100 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Clec4b1Q7TS58 209 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ston2Q8BZ60 895 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 LnpepQ8C129 1025 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Panx3Q8CEG0 392 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Q8CIL4 281 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Gsto2Q8K2Q2 248 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Mrpl58Q8R035 206 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Slc35f5Q8R314 524 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 MyocdQ8VIM5 935 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 GcshQ91WK5 170 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Necab2Q91ZP9 389 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Tpgs1Q99MS8 303 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 GsdmcQ99NB5 468 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Mrps17Q9CQE3 120 aaKnown RBP13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ccr10Q9JL21 362 aa13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Sf3b1Q99NB9 1304 aaKnown RBP13.51□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ptpn9O35239 593 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Prkg1P0C605 671 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 PfkmP47857 780 aaKnown RBP13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Cyth2P63034 400 aaKnown RBP13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Kir3dl1P83555 432 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Hace1Q3U0D9 909 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 E330034G19RikQ3UWX6 351 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Zfp956Q3UZY6 572 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Htr1aQ64264 421 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Atp2a3Q64518 1038 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Txndc8Q69AB2 127 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Supt20hQ7TT00 530 aaKnown RBP13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Stk32aQ8BGW6 398 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Pum3Q8BKS9 647 aaKnown RBP13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Znf385bQ8BXJ8 482 aaKnown RBP13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Wwp1Q8BZZ3 918 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Agbl2Q8CDK2 862 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ago3Q8CJF9 860 aa13.5□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Trappc12Q8K2L8 797 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms