RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Atad3Q925I1 591 aa13.78□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Ccdc182Q9D9C6 152 aa13.78□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Trim54Q9ERP3 366 aa13.78□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Msl3Q9WVG9 525 aa13.78□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 A930018M24RikB7ZMY3 218 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Itga9B8JK39 1036 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 9330159F19RikD3Z623 648 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Vmn2r104E9Q2J5 860 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Atf6F6VAN0 656 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Trim55G3X8Y1 545 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Cldn5O54942 218 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Slc10a3P21129 473 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Psen1P49769 467 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 SftpbP50405 377 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Sycp3P70281 254 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Pecam1Q08481 727 aaKnown RBP13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 TceancQ3US16 359 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm29609Q3UU56 907 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm11487Q5RIS0 354 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Elf1Q60775 612 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Mapre1Q61166 268 aaKnown RBP13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 SnrpaQ62189 287 aaKnown RBP13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 DazlQ64368 298 aaKnown RBP13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 MyorgQ69ZQ1 716 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Tas2r125Q7M710 311 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gtf3c2Q8BL74 907 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Dcun1d2Q8BZJ7 259 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 CenpuQ8C4M7 410 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Slc36a1Q8K4D3 475 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 ClmpQ8R373 373 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Angel1Q8VCU0 667 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 TfQ921I1 697 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Tas1r2Q925I4 843 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Mrps17Q9CQE3 120 aaKnown RBP13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 PmpcbQ9CXT8 489 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Prss23Q9D6X6 382 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Asb1Q9WV74 336 aa13.77□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm13276A0A087WR18 182 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Grik3B1AS29 919 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Zfp651E9PZ11 729 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm21293E9Q4G9 266 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Spin2fJ3QPU0 254 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Slc27a2O35488 620 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 E2f6O54917 272 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Srpk1O70551 648 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 PenkP22005 268 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ccnb1P24860 430 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 FynP39688 537 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gsdmc2Q2KHK6 480 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gsdmc4Q3TR54 480 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Slc17a7Q3TXX4 560 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Fbxw11Q5SRY7 542 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gstt1Q64471 240 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ripor1Q68FE6 1223 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Adat2Q6P6J0 191 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Parp6Q6P6P7 630 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Tatdn1Q6P8M1 295 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 GnasQ6R0H7 1133 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Olfr299Q7TS05 330 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Znf365Q8BG89 408 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Nim1kQ8BHI9 436 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Wdr59Q8C0M0 992 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Scara3Q8C850 606 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gsdmc3Q8CB12 480 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Spdye4bQ8CDE8 236 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Trib2Q8K4K3 343 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Tasp1Q8R1G1 420 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Zfp617Q91WM0 559 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Dnajc3Q91YW3 504 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Lpin1Q91ZP3 924 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 NonoQ99K48 473 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Cox16Q9CR63 106 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Fgfr1op2Q9CRA9 253 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Arl2Q9D0J4 184 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Polr3cQ9D483 533 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Znf654Q9DAU9 571 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 PnkpQ9JLV6 522 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Orc1Q9Z1N2 840 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Rtl9Q32KG4 1339 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Zmynd8A2A484 1235 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Sh2d4bA6X942 431 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ces1bD3Z5G7 567 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm5814J3QP80 125 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Sypl2O89104 264 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 DesP31001 469 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gdf6P43028 454 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Scg3P47867 471 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 EnahQ03173 802 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Cpne7Q0VE82 557 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Plcl1Q3USB7 1096 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Srrm1Q52KI8 946 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Slc20a1Q61609 681 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Mef2dQ63943 514 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Mon1aQ6PDG8 556 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Dnajb13Q80Y75 316 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Best2Q8BGM5 508 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Abraxas1Q8BPZ8 407 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Klhl38Q8BSF5 581 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Aldh5a1Q8BWF0 523 aa13.76□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Slc39a13Q8BZH0 361 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms