RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ccdc65Q8VHI7 493 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Cpt1bQ924X2 772 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Diaph2O70566 1098 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Grb7Q03160 535 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rbl2Q64700 1135 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Cep104Q80V31 926 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Eif2aQ8BJW6 581 aaKnown RBP16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Csnk1g1Q8BTH8 459 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 PlvapQ91VC4 438 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Adi1Q99JT9 179 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ccdc86Q9JJ89 426 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 GraspQ9JJA9 392 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Nfs1Q9Z1J3 459 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Slc23a1Q9Z2J0 605 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Nlrc5C3VPR6 1915 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Vmn2r19G5E8G4 854 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm3336J3QMQ6 198 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Slc6a20bO88575 635 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Pdcd1Q02242 288 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Fam171bQ14CH0 825 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Tmem237Q3V0J1 427 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Grid1Q61627 1009 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Kank2Q8BX02 843 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 SgczQ8BX51 311 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Abcf3Q8K268 709 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Synpo2Q91YE8 1087 aaKnown RBP16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rilpl2Q99LE1 197 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Foxe3Q9QY14 288 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Tk2Q9R088 270 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Map3k14Q9WUL6 942 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Olfr1023A2ASU6 311 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Mup5P11591 180 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Arl4cP61208 192 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Hrh2P97292 397 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 UrgcpQ5NCI0 926 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Aldh1a2Q62148 518 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 RbfaQ6P3B9 350 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Prrt3Q6PE13 971 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Taco1Q8K0Z7 294 aaKnown RBP16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Mkl1Q8K4J6 964 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Decr1Q9CQ62 335 aaKnown RBP16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gins2Q9D600 185 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Nop56Q9D6Z1 580 aaKnown RBP16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Oxct2bQ9ESL0 520 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Oxct2aQ9JJN4 520 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Bmp15Q9Z0L4 392 aa16.42■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm9774A0A0A6YVU8 407 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm15262A0A140LIQ5 728 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Nup62clA2AG10 272 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Bfsp1A2AMT1 669 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Xpnpep3B7ZMP1 506 aaKnown RBP16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Atf6F6VAN0 656 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Serpinb6eI7HJI3 429 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Pgk1P09411 417 aaKnown RBP16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 NrlP54846 237 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rab6bP61294 208 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Myo6Q64331 1265 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Tatdn1Q6P8M1 295 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Champ1Q8K327 802 aaKnown RBP16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rassf9Q8K342 435 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Defb19Q8K3I8 83 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Lims2Q91XD2 341 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ndufaf7Q9CWG8 436 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ubxn11Q9D572 484 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm36028A0A0U1RPM1 299 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Slc27a2O35488 620 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ap2a2P17427 938 aaKnown RBP16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Nos2P29477 1144 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rfx2P48379 717 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Mc4rP56450 332 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Arl4aP61213 200 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Tekt4Q149S1 447 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Fam81aQ3UXZ6 364 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 ShbQ6PD21 503 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Olfr1057Q7TR75 315 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Sh3d19Q91X43 789 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Vmn2r59E9PUT5 865 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 BtkP35991 659 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Itga11P61622 1188 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Hnrnph2P70333 449 aaKnown RBP16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 SiaeP70665 541 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Cpne7Q0VE82 557 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 DazlQ64368 298 aaKnown RBP16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Olfr1415Q7TQS4 311 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Clec2eQ80XD9 204 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Iars2Q8BIJ6 1012 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Olfr1416Q8VGU4 312 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 FdpsQ920E5 353 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Tmco5aQ9D9D5 303 aa16.41■□□□□ 0.22
Trim39-203ENSMUST00000113706 Iqcj-Schip1A0A088MLT8 559 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rpl21O09167 160 aaKnown RBP16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Schip1P0DPB4 484 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ptprn2P80560 1001 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Zbtb14Q08376 449 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm11487Q5RIS0 354 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rhpn2Q8BWR8 686 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Sntg2Q925E0 539 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Golga1Q9CW79 758 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Polr3cQ9D483 533 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 PygmQ9WUB3 842 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms