RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Havcr2Q8VIM0 281 aa16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Fam32aQ9CR80 112 aaKnown RBP16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Fam227bQ9D518 532 aa16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Vmn2r74E9PW21 853 aa16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Gm379J3QQ19 296 aa16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Lamp1P11438 406 aaKnown RBP16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Irf5P56477 497 aa16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Sash1P59808 1230 aa16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Rad51Q08297 339 aa16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Gpatch4Q3TFK5 415 aaKnown RBP16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 VclQ64727 1066 aaKnown RBP16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Kcnt1Q6ZPR4 1224 aa16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Sel1l3Q80TS8 1137 aa16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 DarsQ922B2 501 aaKnown RBP16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Phf2Q9WTU0 1096 aa16.76■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Syndig1A2ANU3 258 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 TubP50586 505 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Ccna2P51943 422 aaKnown RBP16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Ppp3caP63328 521 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 MelkQ61846 643 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Scube3Q66PY1 993 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Mrpl40Q9Z2Q5 206 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Gm10639E9Q6L7 222 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Gsta2P10648 222 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Irf3P70671 419 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Ano7Q14AT5 859 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Man1c1Q6NXK9 625 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 C6.1alQ7M757 291 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Catsper3Q80W99 395 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Tarsl2Q8BLY2 790 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Gga3Q8BMI3 718 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Pex19Q8VCI5 299 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Vps11Q91W86 941 aaKnown RBP16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Nup50Q9JIH2 466 aaKnown RBP16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 SufuQ9Z0P7 484 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Gm1141B9EJU1 475 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 JundP15066 341 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Emilin3P59900 758 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 S100gP97816 79 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 E330034G19RikQ3UWX6 351 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 P3h1Q3V1T4 739 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Zbtb33Q8BN78 671 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Aldh5a1Q8BWF0 523 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Pkn2Q8BWW9 983 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Abi3Q8BYZ1 367 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Oas1cQ924S2 362 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Acot13Q9CQR4 140 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Ndufa13Q9ERS2 144 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Kcnu1O54982 1121 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Cdkl4Q3TZA2 342 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Nat9Q3UG98 241 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Plcl1Q3USB7 1096 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 CcnjlQ5SRT8 387 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Cyp3a13Q64464 503 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Txndc8Q69AB2 127 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Ggnbp1Q6K1E7 370 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Dsg1bQ7TSF1 1060 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Pgrmc2Q80UU9 217 aaKnown RBP16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Cog2Q921L5 731 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Stx11Q9D3G5 287 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Slit2Q9R1B9 1521 aa16.75■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Gm3755K7N743 167 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Csf1rP09581 977 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Surf2P09926 257 aaKnown RBP16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Zfp560Q3URI6 754 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Lrrc47Q505F5 581 aaKnown RBP16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Soat1Q61263 540 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Kcnj11Q61743 390 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Usp7Q6A4J8 1103 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Eif4bQ8BGD9 611 aaKnown RBP16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Thop1Q8C1A5 687 aaKnown RBP16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Znf426Q8R1D1 550 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 NlnQ91YP2 704 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Arhgef10Q8C033 1345 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 AmhP27106 555 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Akap14Q3V0I7 536 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Atp4aQ64436 1033 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Slain1Q68FF7 579 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Tmtc3Q8BRH0 920 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Cpne3Q8BT60 533 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Scara3Q8C850 606 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Olfr1414Q8VGU5 312 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Asb11Q9CQ31 323 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Q9D2Q3 444 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Pgam1Q9DBJ1 254 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 FanceB8JJD6 213 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 AvilO88398 819 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Orm2P07361 207 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Elk3P41971 409 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Vil1Q62468 827 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Iars2Q8BIJ6 1012 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 PygbQ8CI94 843 aaKnown RBP16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Iqsec1Q8R0S2 961 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Dync1li1Q8R1Q8 523 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Ascc1Q9D8Z1 356 aaKnown RBP16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Serac1Q3U213 654 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Q3UK37 420 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Eps15l1Q60902 907 aaKnown RBP16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Msantd2Q6NZR2 559 aa16.74■□□□□ 0.27
Col18a1-202ENSMUST00000081654 Zdhhc15Q8BGJ0 337 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms