RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Arhgef10Q8C033 1345 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cyp4a29A0A087WPC3 509 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Q3UE31 404 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gtf2a2Q80ZM7 109 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Rmnd1Q8CI78 450 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Mrpl58Q8R035 206 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Sytl2Q99N50 950 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Igf2bp3Q9CPN8 579 aaKnown RBP12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 CoprsQ9CQ13 173 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Slc12a4Q9JIS8 1085 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Serpinb6cW4VSP4 379 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Ttll9A2APC3 461 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gm5930D3Z257 264 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 KyQ8C8H8 661 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Mta1Q8K4B0 715 aaKnown RBP12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Olfr697Q8VFM4 317 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Ascc1Q9D8Z1 356 aaKnown RBP12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Olfr703Q9EPF5 319 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Kat2bQ9JHD1 813 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Prmt2Q9R144 448 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Card9A2AIV8 536 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cyp2c37P56654 490 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Has1Q61647 583 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Sema4bQ62179 823 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Slc13a5Q67BT3 572 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 DgkqQ6P5E8 934 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cyp2c54Q6XVG2 490 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Qsox1Q8BND5 748 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Eif3hQ91WK2 352 aaKnown RBP12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Sgf29Q9DA08 293 aaKnown RBP12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Ruvbl2Q9WTM5 463 aaKnown RBP12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Casq2O09161 415 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Pon1P52430 355 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Irf5P56477 497 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Ccdc138Q0VF22 680 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 IgflQ6B9Z0 140 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Ctxn3Q8BXZ0 80 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Trim35Q8C006 501 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Spdye4bQ8CDE8 236 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Olfr589Q8VGV8 317 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Capn7Q9R1S8 813 aa12.21□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Zfp985A2A7A5 519 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Itga9B8JK39 1036 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 2210016F16RikG3X8U3 338 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Akr1b10G5E895 316 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Vmn2r5K7N788 911 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tnfrsf18O35714 228 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Shoc2O88520 582 aaKnown RBP12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Drg1P32233 367 aaKnown RBP12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 SykP48025 629 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Exoc3l4Q6DIA2 721 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Bcas3Q8CCN5 928 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Bclaf1Q8K019 919 aaKnown RBP12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 DeraQ91YP3 318 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Slamf8Q9D3G2 278 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tex9Q9D845 387 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ccdc103Q9D9P2 237 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 CdylQ9WTK2 593 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cldn3Q9Z0G9 219 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ptgdr2Q9Z2J6 382 aa12.21□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Kctd18E0CZ26 429 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 CkmP07310 381 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Hspa4lP48722 838 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gabpb1Q00420 383 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 4921511C20RikQ8BVT7 469 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 MslnlQ8C160 685 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ulbp1Q8HWA3 334 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr615Q8VGY4 313 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ophn1Q99J31 802 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 FopnlQ9CZS3 174 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Smad9Q9JIW5 430 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 AatfQ9JKX4 526 aaKnown RBP12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Myh2G3UW82 1942 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tjp1P39447 1745 aaKnown RBP12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Rpl7aP12970 266 aaKnown RBP12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Rcsd1Q3UZA1 412 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Rxfp1Q6R6I7 758 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Mfsd14bQ8CIA9 507 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ero1aQ8R180 464 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Stx19Q8R1Q0 292 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr348Q8VGK3 313 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Nme5Q99MH5 211 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Klhl28Q9CR40 571 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pik3cgQ9JHG7 1102 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gprc5dQ9JIL6 344 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Slc25a13Q9QXX4 676 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 1700122O11RikJ3QPW6 241 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Has3O08650 554 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 AvilO88398 819 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Hspa9P38647 679 aaKnown RBP12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Elk3P41971 409 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Aste1Q8BIR2 672 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tarsl2Q8BLY2 790 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ankrd52Q8BTI7 1076 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Glra3Q91XP5 464 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Zbtb12Q9Z150 459 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr611K7N609 323 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr612L7N462 323 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Luc7l3Q5SUF2 432 aaKnown RBP12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Dnajc1Q61712 552 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms