RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Klhl12Q8BZM0 568 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Evi2bQ8VD58 444 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Oas1dQ8VI95 361 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Tomm20lQ9D4V6 152 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Krt6bQ9Z331 562 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ifrd1P19182 449 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cbx3P23198 183 aaKnown RBP10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 HdcP23738 662 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fmr1P35922 614 aaKnown RBP10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Grm2Q14BI2 872 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mrgprx2Q3UG50 352 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 LdhdQ7TNG8 484 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Dlgap2Q8BJ42 1059 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Srp68Q8BMA6 625 aaKnown RBP10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Snapc1Q8K0S9 389 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Trappc12Q8K2L8 797 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Slc25a38Q91XD8 326 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Q99LU8 229 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Khdc3Q9CWU5 440 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 GrapQ9CX99 217 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fam227bQ9D518 532 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rnft1Q9DCN7 395 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Kifc1Q9QWT9 674 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Bscl2Q9Z2E9 383 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ttc7bE9Q6P5 843 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Alox5P48999 674 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 AdslP54822 484 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fam172aQ3TNH5 417 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Szrd1Q6NXN1 152 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Clca4aQ6Q473 924 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 PlgrktQ9D3P8 147 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 PllpQ9DCU2 182 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Hsd3b7Q9EQC1 369 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Arid3bQ9Z1N7 568 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fam166bA2AIP0 273 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Klhl32A2AJX0 620 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cyp2t4E9PWV0 503 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 H2-M9O19442 342 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tgm2P21981 686 aaKnown RBP10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Psen1P49769 467 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gabpb1Q00420 383 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Alkbh5Q3TSG4 395 aaKnown RBP10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ccdc185Q3V118 621 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Phactr4Q501J7 694 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lrrc47Q505F5 581 aaKnown RBP10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ugt1a9Q62452 528 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Glis3Q6XP49 780 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 1700001J03RikQ80ZR8 219 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fam49aQ8BHZ0 323 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gucy1b2Q8BXH3 824 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Caskin2Q8VHK1 1201 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 TfQ921I1 697 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 GOLGA7BQ9D428 167 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Sertad2Q9JJG5 309 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Hs6st1Q9QYK5 411 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Katna1Q9WV86 491 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Arih2Q9Z1K6 492 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 ShprhQ7TPQ3 1674 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 XntrpcF8VQM8 1264 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tpst1O70281 370 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nat9Q3UG98 241 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 P3h1Q3V1T4 739 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gpbp1l1Q6NZP2 473 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Kcnt1Q6ZPR4 1224 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Afg3l2Q8JZQ2 802 aaKnown RBP10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fam20bQ8VCS3 409 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 ScgnQ91WD9 276 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cog2Q921L5 731 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Efcab1Q9D3N2 212 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Rpap3Q9D706 660 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Myoz2Q9JJW5 264 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Trpc2Q9R244 1172 aa10.4□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ctnnd2O35927 1247 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 PlaaP27612 794 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Sephs2P97364 452 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Igsf9Q05BQ1 1179 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc38a5Q3U1J0 479 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Rmdn3Q3UJU9 470 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fam214aQ69ZK7 1075 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mfn2Q80U63 757 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Suz12Q80U70 741 aaKnown RBP10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 HadhaQ8BMS1 763 aaKnown RBP10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Smg8Q8VE18 991 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pcyox1Q9CQF9 505 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Inpp4aQ9EPW0 939 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Rps6kb2Q9Z1M4 485 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mroh1E0CZ22 1640 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ifi213D3Z5G0 586 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Rrm1P07742 792 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 BtkP35991 659 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 TfamP40630 243 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nfe2l2Q60795 597 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lcn3Q62471 182 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tgm6Q8BM11 706 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ckap4Q8BMK4 575 aaKnown RBP10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 GmppbQ8BTZ7 360 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Znf428Q8C1M2 176 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tmem154Q8C4Q9 181 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Vangl2Q91ZD4 521 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Apobec3Q99J72 440 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms