RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Atp13a3Q5XF89 1219 aa17.16■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Clec4a4Q5YIR8 236 aa17.16■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Lemd2Q6DVA0 511 aa17.16■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Ntrk3Q6VNS1 825 aa17.16■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Slc38a7Q8BWH0 463 aa17.16■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Fam20bQ8VCS3 409 aa17.16■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Olfr1361Q8VFH0 317 aa17.16■□□□□ 0.34
Col17a1-201ENSMUST00000026045 TcimQ9D915 106 aa17.16■□□□□ 0.34
Col17a1-201ENSMUST00000026045 H2afyQ9QZQ8 372 aaKnown RBP17.16■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Arid3bQ9Z1N7 568 aa17.16■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Atp8b4A2ANX3 1194 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Fam172aQ3TNH5 417 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Elmo3Q8BYZ7 720 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 CenpxQ8C4X1 78 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Sorcs3Q8VI51 1219 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 PfasQ5SUR0 1337 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Zc3h4Q6ZPZ3 1304 aaKnown RBP17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Smok3cA0A087WSF2 504 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Armt1A6H630 439 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Crabp2P22935 138 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 CidecP56198 239 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Msx3P70354 204 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Gm45902Q3UDN3 361 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Znf579Q80VM4 562 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Snx16Q8C080 344 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Depdc1aQ8CIG0 804 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Inpp4aQ9EPW0 939 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 KelQ9EQF2 713 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Nudt5Q9JKX6 218 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Ccnb1ip1D3Z3K2 276 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Tbc1d12Q6A039 696 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Thap3Q8BJ25 218 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Dpp9Q8BVG4 862 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 P3h2Q8CG71 703 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Gatad2aQ8CHY6 629 aaKnown RBP17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Gprc6aQ8K4Z6 928 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Gm17093F6XGJ4 214 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Gm5849J3QPE5 117 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Sema6aO35464 1031 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Dsg3O35902 993 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Soat2O88908 525 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Alkbh1P0CB42 389 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Copz1P61924 177 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Ankrd13bQ5F259 626 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 SpdyaQ5IBH7 310 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Nr1h4Q60641 488 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 ThrspQ62264 150 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Hmgb4Q6P8W9 181 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Zswim5Q80TC6 1188 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 DcakdQ8BHC4 231 aaKnown RBP17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 MispQ9D279 648 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Atp13a1Q9EPE9 1200 aaKnown RBP17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Calm4Q9JM83 148 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Klhl4B1AZR0 717 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Unc13dB2RUP2 1085 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 GclmO09172 274 aaKnown RBP17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Slc16a1P53986 493 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Mccc1Q99MR8 717 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Gpihbp1Q9D1N2 228 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Gprc5dQ9JIL6 344 aa17.15■□□□□ 0.34
Col17a1-201ENSMUST00000026045 Bnip3O55003 187 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Magea1O89006 320 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Magea5O89009 320 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Rrm2P11157 390 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Scd1P13516 355 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Plin2P43883 425 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Lsm3P62311 102 aaKnown RBP17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Rbm46P86049 533 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Asprv1Q09PK2 339 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Brd9Q3UQU0 596 aaKnown RBP17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Kansl1lQ5DTI6 991 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Egfl8Q6GUQ1 293 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Chtf18Q8BIW9 969 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Q8BL95 290 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Mnd1Q8K396 205 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Necab2Q91ZP9 389 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Magea2Q9R2A2 320 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Pramef17A2ASJ1 475 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Igfbp4P47879 254 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 HpcaP84075 193 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 4933427I04RikQ3V053 235 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Tex24Q5DP50 351 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Stip1Q60864 543 aaKnown RBP17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Eif2b4Q61749 524 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Slc13a5Q67BT3 572 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Phf21aQ6ZPK0 659 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Phka2Q8BWJ3 1235 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Smtnl2Q8CI12 456 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Cdhr1Q8VHP6 859 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Srsf11E9Q6E5 511 aaKnown RBP17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Angpt2O35608 496 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Apoa4P06728 395 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Mbl1P39039 239 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Gm8773Q3UQ24 132 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Dennd5aQ6PAL8 1287 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Cspg5Q71M36 566 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Plekha8Q80W71 519 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Ric8bQ80XE1 520 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Dusp4Q8BFV3 398 aa17.14■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Twf1Q91YR1 350 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms