RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 BARX2Q9UMQ3 279 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-233ENST00000642021 ANK1P16157 1881 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 F5H423 210 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-233ENST00000642021 GAS2O43903 313 aaKnown RBP14.32□□□□□ -0.12
PHGDH-233ENST00000642021 SNNO75324 88 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-233ENST00000642021 BPGMP07738 259 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 ADORA2AP29274 412 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 MAGEA3P43357 314 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 MAGEA6P43360 314 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 IGBP1P78318 339 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 UBAP2LQ14157 1087 aaKnown RBP14.32□□□□□ -0.12
PHGDH-233ENST00000642021 BOLA3Q53S33 107 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 CELF3Q5SZQ8 465 aaKnown RBP14.32□□□□□ -0.12
PHGDH-233ENST00000642021 PPP1R26Q5T8A7 1209 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-233ENST00000642021 ATG16L1Q676U5 607 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 C16orf46Q6P387 395 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 OLFML1Q6UWY5 402 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 STMN2Q93045 179 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 LPIN3Q9BQK8 851 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 CCDC106Q9BWC9 280 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 CXCL16Q9H2A7 254 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 LRCH1Q9Y2L9 728 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 RPS6KL1Q9Y6S9 549 aa14.32□□□□□ -0.12
PHGDH-233ENST00000642021 FAM159BA6NKW6 160 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 SP100P23497 879 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-233ENST00000642021 AP1B1Q10567 949 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 PDK2Q15119 407 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 AMHR2Q16671 573 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 LGSNQ5TDP6 509 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 ATG14Q6ZNE5 492 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 PLPPR4Q7Z2D5 763 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 TTC30AQ86WT1 665 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 FGD4Q96M96 766 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 SPATA33Q96N06 139 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 PANX3Q96QZ0 392 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 EBNA1BP2Q99848 306 aaKnown RBP14.31□□□□□ -0.12
PHGDH-233ENST00000642021 THTPAQ9BU02 230 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 MAF1Q9H063 256 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 SPATC1LQ9H0A9 340 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 CYP3A43Q9HB55 503 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 PIDD1Q9HB75 910 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 HBS1LQ9Y450 684 aaKnown RBP14.31□□□□□ -0.12
PHGDH-233ENST00000642021 A0A087WZ62 844 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 MAGEC1O60732 1142 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 KRT38O76015 456 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 TGM2P21980 687 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 HDAC4P56524 1084 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 SH3D19Q5HYK7 790 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 RNF220Q5VTB9 566 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 IRGCQ6NXR0 463 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 STKLD1Q8NE28 680 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 FDXACB1Q9BRP7 624 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-233ENST00000642021 PIH1D1Q9NWS0 290 aaKnown RBP14.31□□□□□ -0.12
PHGDH-233ENST00000642021 SLC7A8Q9UHI5 535 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 MFHAS1Q9Y4C4 1052 aa14.31□□□□□ -0.12
PHGDH-233ENST00000642021 ITM2AO43736 263 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 LYPLA1O75608 230 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-233ENST00000642021 CRHR1P34998 444 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 CRADDP78560 199 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 INCA1Q0VD86 236 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 LBRQ14739 615 aaKnown RBP14.3□□□□□ -0.12
PHGDH-233ENST00000642021 SMAD1Q15797 465 aaKnown RBP14.3□□□□□ -0.12
PHGDH-233ENST00000642021 GOLGA7BQ2TAP0 167 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 DALRD3Q5D0E6 543 aaKnown RBP14.3□□□□□ -0.12
PHGDH-233ENST00000642021 THEMIS2Q5TEJ8 643 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 OR52E8Q6IFG1 317 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 CRLF3Q8IUI8 442 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 SCUBE1Q8IWY4 988 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 NETO2Q8NC67 525 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 MCUQ8NE86 351 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 GSDMBQ8TAX9 411 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 ZNF778Q96MU6 729 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 FRMD8Q9BZ67 464 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-233ENST00000642021 PDZD7Q9H5P4 517 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 NME7Q9Y5B8 376 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 SSC5DA1L4H1 1573 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 PAPSS1O43252 624 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-233ENST00000642021 CYP2F1P24903 491 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 ATICP31939 592 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 MXRA7P84157 204 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 RIPOR1Q6ZS17 1223 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 FBXO16Q8IX29 292 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-233ENST00000642021 ULK2Q8IYT8 1036 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 SLC25A41Q8N5S1 370 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.3□□□□□ -0.122e-7■■□□□ 13.6
PHGDH-233ENST00000642021 CFAP61Q8NHU2 1237 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 RILPQ96NA2 401 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 MIS12Q9H081 205 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 WWP1Q9H0M0 922 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 FAM49BQ9NUQ9 324 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 MKS1Q9NXB0 559 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 TAGLN3Q9UI15 199 aa14.3□□□□□ -0.12
PHGDH-233ENST00000642021 A8MXQ7 604 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 TM7SF2O76062 418 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 SKIP12755 728 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 SDC4P31431 198 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 STX3Q13277 289 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 TRIM42Q8IWZ5 723 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms