RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 DGKIO75912 1065 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 TOMM70O94826 608 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 ZNF143P52747 638 aaPredicted RBP18.1■□□□□ 0.49
SCARB2-223ENST00000640640 ST8SIA6P61647 398 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 TRIP10Q15642 601 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 MSL3Q8N5Y2 521 aaKnown RBP18.1■□□□□ 0.49
SCARB2-223ENST00000640640 KDM4CQ9H3R0 1056 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 C2CD2Q9Y426 696 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 M0R2N6 131 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 LCA5LO95447 670 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 SPDYAQ5MJ70 313 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 MTDHQ86UE4 582 aaKnown RBP18.09■□□□□ 0.49
SCARB2-223ENST00000640640 BSNDQ8WZ55 320 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 ULBP1Q9BZM6 244 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 ST6GALNAC4Q9H4F1 302 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 VPS9D1Q9Y2B5 631 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 ALDH2P05091 517 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 GRK2P25098 689 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 PTPN7P35236 360 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 ATXN3P54252 364 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-223ENST00000640640 ARHGEF7Q14155 803 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 CNGA3Q16281 694 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 PDCD2Q16342 344 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-223ENST00000640640 PRAMEF19Q5SWL8 479 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 SUGP1Q8IWZ8 645 aaKnown RBP18.09■□□□□ 0.49
SCARB2-223ENST00000640640 YIPF3Q9GZM5 350 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 POPDC2Q9HBU9 364 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 NT5MQ9NPB1 228 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 RUVBL2Q9Y230 463 aaKnown RBP18.09■□□□□ 0.49
SCARB2-223ENST00000640640 DRG1Q9Y295 367 aaKnown RBP18.09■□□□□ 0.49
SCARB2-223ENST00000640640 DNAJC16Q9Y2G8 782 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 LIASO43766 372 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 LTFP02788 710 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 ETS1P14921 441 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 CPA3P15088 417 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 TCN1P20061 433 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-223ENST00000640640 MTMR14Q8NCE2 650 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 APBB2Q92870 758 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 SH3KBP1Q96B97 665 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 TSPYL2Q9H2G4 693 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-223ENST00000640640 PCDHGB4Q9UN71 923 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 TRPV2Q9Y5S1 764 aa18.09■□□□□ 0.49
SCARB2-223ENST00000640640 C2orf81A6NN90 581 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 SKAP2O75563 359 aaPredicted RBP18.08■□□□□ 0.49
SCARB2-223ENST00000640640 HOXC6P09630 235 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 CATSPER1Q8NEC5 780 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 CLEC4DQ8WXI8 215 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 ASPSCR1Q9BZE9 553 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 ARHGAP28Q9P2N2 729 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 MGEA5O60502 916 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 GP5P40197 560 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 CDH17Q12864 832 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 ELAVL2Q12926 359 aaKnown RBP18.08■□□□□ 0.49
SCARB2-223ENST00000640640 CXCL17Q6UXB2 119 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 AMIGO3Q86WK7 504 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 ATXN2LQ8WWM7 1075 aaKnown RBP18.08■□□□□ 0.49
SCARB2-223ENST00000640640 SEPT8Q92599 483 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 KANSL3Q9P2N6 904 aa18.08■□□□□ 0.49
SCARB2-223ENST00000640640 TRPC5OSA6NMA1 111 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 SHBGP04278 402 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 MED21Q13503 144 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 POU6F1Q14863 301 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 SLC35G1Q2M3R5 365 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 MARC1Q5VT66 337 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 APTXQ7Z2E3 356 aaKnown RBP18.08■□□□□ 0.48
SCARB2-223ENST00000640640 NUP93Q8N1F7 819 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 HSFY1Q96LI6 401 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 PDGFCQ9NRA1 345 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 TRPM5Q9NZQ8 1165 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 SALL4Q9UJQ4 1053 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 CKMP06732 381 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 NOS2P35228 1153 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 MBOAT7Q96N66 472 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 CTNNAL1Q9UBT7 734 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 ARHGAP26Q9UNA1 814 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 UMODL1Q5DID0 1318 aa18.08■□□□□ 0.48
SCARB2-223ENST00000640640 MAGEB16A2A368 324 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 ZNF862O60290 1169 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 TPH1P17752 444 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 ARF4P18085 180 aaPredicted RBP18.07■□□□□ 0.48
SCARB2-223ENST00000640640 MAP4P27816 1152 aaKnown RBP18.07■□□□□ 0.48
SCARB2-223ENST00000640640 TAS2R40P59535 323 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 DNAJC9Q8WXX5 260 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 ELOVL4Q9GZR5 314 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 MTIF3Q9H2K0 278 aaKnown RBP18.07■□□□□ 0.48
SCARB2-223ENST00000640640 FBXO44Q9H4M3 255 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 RXFP1Q9HBX9 757 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 CFAP99D6REC4 459 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 YBX3P16989 372 aaKnown RBP eCLIP18.07■□□□□ 0.48
SCARB2-223ENST00000640640 PTPN1P18031 435 aaKnown RBP18.07■□□□□ 0.48
SCARB2-223ENST00000640640 MGAT1P26572 445 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 INPP5AQ14642 412 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 AP1ARQ63HQ0 302 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 WSCD1Q658N2 575 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 LAYNQ6UX15 382 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 BBS12Q6ZW61 710 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 TOPAZ1Q8N9V7 1692 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 DCDC2CA8MYV0 355 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 BDNFP23560 247 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 KLC1Q07866 573 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms